RNAct
Search
Pairwise
Browse
Proteins
RNAs
Download
About
Search
Protein–RNA interactions for Protein: O75056
SDC3, Syndecan-3, human
Predictions only
Length
442 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
SDC3
O75056
AC211469.2-201
ENST00000605461
205 nt
BASIC
0.98
□□□□□ -2.25
SDC3
O75056
MGAT4C-209
ENST00000611864
25116 nt
APPRIS P1
TSL 5
BASIC
0.98
□□□□□ -2.25
SDC3
O75056
MIR373-201
ENST00000362273
69 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
Y_RNA.253-201
ENST00000364562
112 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
Y_RNA.310-201
ENST00000365063
113 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
Y_RNA.336-201
ENST00000365307
109 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
Y_RNA.368-201
ENST00000365547
113 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
MIR452-201
ENST00000385020
85 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
MIR522-201
ENST00000385071
87 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
MIR613-201
ENST00000385248
95 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
Y_RNA.579-201
ENST00000390939
94 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
SNORD12-201
ENST00000391002
90 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
RPL39P39-201
ENST00000455840
151 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
AC092892.1-201
ENST00000496067
327 nt
TSL 5
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
AC114811.1-201
ENST00000507207
168 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
RNA5SP436-201
ENST00000516020
115 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
RNA5SP480-201
ENST00000516840
109 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
AP003715.1-201
ENST00000532109
435 nt
TSL 3
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
MIR3973-201
ENST00000579824
107 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
MIR4795-201
ENST00000584182
89 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
AC032019.2-201
ENST00000584916
403 nt
TSL 5
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
PVT1_3.1-201
ENST00000620853
95 nt
BASIC
0.97
□□□□□ -2.25
SDC3
O75056
SNORD81.1-201
ENST00000363064
77 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
Y_RNA.331-201
ENST00000365267
102 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
AC117470.1-201
ENST00000381974
330 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
Y_RNA.395-201
ENST00000383945
109 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
Y_RNA.456-201
ENST00000384232
111 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
Y_RNA.551-201
ENST00000384661
102 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
MIR19B1-201
ENST00000384829
87 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
MIR7-2-201
ENST00000384970
110 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
PIGPP3-201
ENST00000425307
415 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
LINC01399-202
ENST00000458450
244 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
U8.20-201
ENST00000459445
131 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
UBL5P1-201
ENST00000507979
193 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
RNU7-116P-201
ENST00000516940
62 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
HSPE1P19-201
ENST00000603327
295 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
AL080274.1-201
ENST00000605565
220 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
AL133255.1-201
ENST00000606374
441 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
AC103810.9-201
ENST00000606688
112 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
TRAJ36-201
ENST00000614481
58 nt
APPRIS P1
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
Y_RNA.804-201
ENST00000615262
101 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
AC012676.2-201
ENST00000619258
186 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
AL008636.1-201
ENST00000625038
1018 nt
BASIC
0.96
□□□□□ -2.26
SDC3
O75056
RNU4-50P-201
ENST00000364361
141 nt
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
Y_RNA.439-201
ENST00000384119
94 nt
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
Y_RNA.540-201
ENST00000384638
111 nt
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
RNU6ATAC8P-201
ENST00000408460
126 nt
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
RNU6-855P-201
ENST00000410395
104 nt
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
MTATP6P23-201
ENST00000440153
476 nt
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
AC122707.1-201
ENST00000502882
219 nt
TSL 2
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
AL117351.2-201
ENST00000513571
157 nt
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
SNORD79.1-201
ENST00000516069
84 nt
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
RRM2B-207
ENST00000519962
201 nt
TSL 1 (best)
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
AC136932.1-201
ENST00000574771
208 nt
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
MIR4698-201
ENST00000577795
80 nt
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
AP001094.1-201
ENST00000579805
193 nt
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
AC011373.1-201
ENST00000607270
237 nt
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
FAM19A1-204
ENST00000617084
159 nt
TSL 5
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
AL442644.1-201
ENST00000454390
3105 nt
BASIC
0.95
□□□□□ -2.26
SDC3
O75056
HIF1A-204
ENST00000539097
3956 nt
TSL 1 (best)
BASIC
0.94
□□□□□ -2.26
SDC3
O75056
Y_RNA.341-201
ENST00000365341
102 nt
BASIC
0.94
□□□□□ -2.26
SDC3
O75056
MIR1302-11-201
ENST00000408051
138 nt
BASIC
0.94
□□□□□ -2.26
SDC3
O75056
MIR1302-9-201
ENST00000408365
138 nt
BASIC
0.94
□□□□□ -2.26
SDC3
O75056
MIR1302-10-201
ENST00000408734
138 nt
BASIC
0.94
□□□□□ -2.26
SDC3
O75056
MIR1298-201
ENST00000408783
112 nt
BASIC
0.94
□□□□□ -2.26
SDC3
O75056
AL365434.1-201
ENST00000412362
380 nt
TSL 3
BASIC
0.94
□□□□□ -2.26
SDC3
O75056
AC024067.1-201
ENST00000426199
223 nt
BASIC
0.94
□□□□□ -2.26
SDC3
O75056
HMGN1P10-201
ENST00000474557
553 nt
BASIC
0.94
□□□□□ -2.26
SDC3
O75056
MIR1302-2-201
ENST00000607096
138 nt
BASIC
0.94
□□□□□ -2.26
SDC3
O75056
uc_338.22-201
ENST00000622722
187 nt
BASIC
0.94
□□□□□ -2.26
SDC3
O75056
SERPINI2-207
ENST00000476257
1837 nt
APPRIS P1
TSL 5
BASIC
0.94
□□□□□ -2.26
SDC3
O75056
AL391516.1-201
ENST00000554380
2449 nt
BASIC
0.94
□□□□□ -2.26
SDC3
O75056
KLRA1P-203
ENST00000535939
2353 nt
TSL 1 (best)
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
Y_RNA.80-201
ENST00000362996
102 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
Y_RNA.363-201
ENST00000365529
113 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
Y_RNA.485-201
ENST00000384395
102 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
MIR598-201
ENST00000384868
97 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
AC063976.4-201
ENST00000421971
163 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
MTND1P14-201
ENST00000427400
950 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
RNU6-1170P-201
ENST00000515974
106 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
SNORD111.1-201
ENST00000516421
86 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
SNORD45.4-201
ENST00000516629
73 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
RNU7-110P-201
ENST00000516891
62 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
AC040926.1-201
ENST00000530195
238 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
DEFB117-201
ENST00000602356
141 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
AP003357.1-201
ENST00000604497
148 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
PRELID3BP2-201
ENST00000605362
201 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
AL096861.1-201
ENST00000610899
123 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
AC006157.1-201
ENST00000611750
366 nt
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
ANGPTL3-201
ENST00000371129
2805 nt
APPRIS P1
TSL 1 (best)
BASIC
0.93
□□□□□ -2.26
SDC3
O75056
SNORD14.1-201
ENST00000365609
90 nt
BASIC
0.92
□□□□□ -2.26
SDC3
O75056
Y_RNA.431-201
ENST00000384086
102 nt
BASIC
0.92
□□□□□ -2.26
SDC3
O75056
SNORA80D-201
ENST00000384488
135 nt
BASIC
0.92
□□□□□ -2.26
SDC3
O75056
MIR15B-201
ENST00000385045
98 nt
BASIC
0.92
□□□□□ -2.26
SDC3
O75056
AL138808.1-201
ENST00000441428
371 nt
TSL 2
BASIC
0.92
□□□□□ -2.26
SDC3
O75056
HMGN2P32-201
ENST00000444648
269 nt
BASIC
0.92
□□□□□ -2.26
SDC3
O75056
Y_RNA.639-201
ENST00000458981
102 nt
BASIC
0.92
□□□□□ -2.26
SDC3
O75056
Y_RNA.714-201
ENST00000517065
90 nt
BASIC
0.92
□□□□□ -2.26
SDC3
O75056
POLR3GP1-201
ENST00000594073
261 nt
BASIC
0.92
□□□□□ -2.26
SDC3
O75056
AL391903.3-201
ENST00000612158
163 nt
BASIC
0.92
□□□□□ -2.26
First
Previous
960
Next
Last
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms