Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 AC106754.2-201ENST00000623006 233 ntBASIC1.36□□□□□ -2.19
XRCC3O43542 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.35□□□□□ -2.19
XRCC3O43542 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
XRCC3O43542 MIR378A-201ENST00000362177 66 ntBASIC1.35□□□□□ -2.19
XRCC3O43542 RNU6-1048P-201ENST00000364054 107 ntBASIC1.35□□□□□ -2.19
XRCC3O43542 RNU6-163P-201ENST00000384396 106 ntBASIC1.35□□□□□ -2.19
XRCC3O43542 MIR320A-201ENST00000385302 82 ntBASIC1.35□□□□□ -2.19
XRCC3O43542 SNORA26.5-201ENST00000391215 123 ntBASIC1.35□□□□□ -2.19
XRCC3O43542 MIR891A-201ENST00000401237 79 ntBASIC1.35□□□□□ -2.19
XRCC3O43542 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.35□□□□□ -2.19
XRCC3O43542 AC023790.1-201ENST00000482174 347 ntBASIC1.35□□□□□ -2.19
XRCC3O43542 RNU6-250P-201ENST00000516958 103 ntBASIC1.35□□□□□ -2.19
XRCC3O43542 AL512310.8-201ENST00000550183 120 ntBASIC1.35□□□□□ -2.19
XRCC3O43542 AC090049.2-201ENST00000550377 109 ntBASIC1.35□□□□□ -2.19
XRCC3O43542 MIR3664-201ENST00000579074 99 ntBASIC1.35□□□□□ -2.19
XRCC3O43542 AL512605.2-201ENST00000592972 256 ntBASIC1.35□□□□□ -2.19
XRCC3O43542 MIR8081-201ENST00000611533 95 ntBASIC1.35□□□□□ -2.19
XRCC3O43542 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.34□□□□□ -2.19
XRCC3O43542 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
XRCC3O43542 Y_RNA.145-201ENST00000363527 102 ntBASIC1.34□□□□□ -2.19
XRCC3O43542 RNU6-674P-201ENST00000363831 107 ntBASIC1.34□□□□□ -2.19
XRCC3O43542 SNORA2.2-201ENST00000365473 135 ntBASIC1.34□□□□□ -2.19
XRCC3O43542 RNU6-969P-201ENST00000383900 105 ntBASIC1.34□□□□□ -2.19
XRCC3O43542 SNORA36B-201ENST00000410438 131 ntBASIC1.34□□□□□ -2.19
XRCC3O43542 RN7SKP51-201ENST00000410781 304 ntBASIC1.34□□□□□ -2.19
XRCC3O43542 PIGPP3-201ENST00000425307 415 ntBASIC1.34□□□□□ -2.19
XRCC3O43542 AC114811.1-201ENST00000507207 168 ntBASIC1.34□□□□□ -2.19
XRCC3O43542 MIR4719-201ENST00000585233 84 ntBASIC1.34□□□□□ -2.19
XRCC3O43542 MIR4781-201ENST00000585250 76 ntBASIC1.34□□□□□ -2.19
XRCC3O43542 AC037487.3-201ENST00000606668 112 ntBASIC1.34□□□□□ -2.19
XRCC3O43542 AC084768.2-201ENST00000622736 221 ntBASIC1.34□□□□□ -2.19
XRCC3O43542 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
XRCC3O43542 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
XRCC3O43542 MIR337-201ENST00000362281 93 ntBASIC1.33□□□□□ -2.2
XRCC3O43542 SNORA25.1-201ENST00000362326 128 ntBASIC1.33□□□□□ -2.2
XRCC3O43542 Y_RNA.16-201ENST00000362421 102 ntBASIC1.33□□□□□ -2.2
XRCC3O43542 RNU6-899P-201ENST00000363947 107 ntBASIC1.33□□□□□ -2.2
XRCC3O43542 RNU6-738P-201ENST00000384531 106 ntBASIC1.33□□□□□ -2.2
XRCC3O43542 RNU6-763P-201ENST00000390865 106 ntBASIC1.33□□□□□ -2.2
XRCC3O43542 RNU6-1203P-201ENST00000410703 110 ntBASIC1.33□□□□□ -2.2
XRCC3O43542 SNRPGP10-201ENST00000432323 225 ntBASIC1.33□□□□□ -2.2
XRCC3O43542 MTND5P22-201ENST00000458380 195 ntBASIC1.33□□□□□ -2.2
XRCC3O43542 RPL30P7-201ENST00000479312 323 ntBASIC1.33□□□□□ -2.2
XRCC3O43542 AC091959.1-201ENST00000495857 238 ntBASIC1.33□□□□□ -2.2
XRCC3O43542 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
XRCC3O43542 AP001485.1-201ENST00000604799 199 ntBASIC1.33□□□□□ -2.2
XRCC3O43542 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.33□□□□□ -2.2
XRCC3O43542 RNU1-42P-201ENST00000364033 160 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 RNA5SP190-201ENST00000365222 118 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 RNU6-514P-201ENST00000384208 107 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 RNU6-131P-201ENST00000391144 107 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 MIR548F4-201ENST00000408515 105 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 MLLT10P1-201ENST00000418346 262 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 SNORD13-201ENST00000459299 104 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 RNU6-437P-201ENST00000459408 95 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 Y_RNA.637-201ENST00000459424 114 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 SERF1AP1-201ENST00000514575 187 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 RNU6-917P-201ENST00000516294 104 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 RNU6-970P-201ENST00000516312 107 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 RNU6-1338P-201ENST00000516328 91 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 SNORA27.4-201ENST00000516650 95 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 RNU6-635P-201ENST00000516651 102 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 Y_RNA.714-201ENST00000517065 90 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 MIR4498-201ENST00000577599 66 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 MIR4255-201ENST00000579351 72 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 MIR2681-201ENST00000581814 105 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 AC005357.1-201ENST00000588399 301 ntBASIC1.32□□□□□ -2.2
XRCC3O43542 AC134026.1-201ENST00000623249 2239 ntBASIC1.31□□□□□ -2.2
XRCC3O43542 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
XRCC3O43542 Y_RNA.796-201ENST00000364268 102 ntBASIC1.31□□□□□ -2.2
XRCC3O43542 Y_RNA.799-201ENST00000364992 102 ntBASIC1.31□□□□□ -2.2
XRCC3O43542 snoU2-30.1-201ENST00000365012 70 ntBASIC1.31□□□□□ -2.2
XRCC3O43542 RNU6-144P-201ENST00000383951 107 ntBASIC1.31□□□□□ -2.2
XRCC3O43542 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
XRCC3O43542 MTCO2P33-201ENST00000402100 465 ntBASIC1.31□□□□□ -2.2
XRCC3O43542 MTATP8P1-201ENST00000467115 207 ntBASIC1.31□□□□□ -2.2
XRCC3O43542 RNU6-322P-201ENST00000516010 103 ntBASIC1.31□□□□□ -2.2
XRCC3O43542 SNORD45.4-201ENST00000516629 73 ntBASIC1.31□□□□□ -2.2
XRCC3O43542 RNU6-922P-201ENST00000516753 99 ntBASIC1.31□□□□□ -2.2
XRCC3O43542 AC008737.2-201ENST00000599446 118 ntBASIC1.31□□□□□ -2.2
XRCC3O43542 MIR502-201ENST00000606349 86 ntBASIC1.31□□□□□ -2.2
XRCC3O43542 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.31□□□□□ -2.2
XRCC3O43542 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
XRCC3O43542 UBE2WP1-201ENST00000362030 340 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 RNU6-1084P-201ENST00000362498 107 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 RNU6-1272P-201ENST00000362776 107 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 RNU6-1209P-201ENST00000363655 107 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 Y_RNA.217-201ENST00000364214 105 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 Y_RNA.226-201ENST00000364337 114 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 SNORD50B-201ENST00000364995 70 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 RNU6-713P-201ENST00000384761 107 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 MIR526A1-201ENST00000384897 85 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 MIR1287-201ENST00000408492 90 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 Y_RNA.641-201ENST00000459414 105 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 RNU6-570P-201ENST00000517051 105 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 CYP3A52P-201ENST00000563326 91 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 GHRLOS.1-201ENST00000610995 70 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 JPX_2.1-201ENST00000614161 69 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms