Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RN7SKP192-201ENST00000411291 327 ntBASIC2.02□□□□□ -2.09
PHGDHO43175 MLLT10P1-201ENST00000418346 262 ntBASIC2.02□□□□□ -2.09
PHGDHO43175 Y_RNA.644-201ENST00000459006 113 ntBASIC2.02□□□□□ -2.09
PHGDHO43175 OR9P1P-201ENST00000496431 281 ntBASIC2.02□□□□□ -2.09
PHGDHO43175 Y_RNA.674-201ENST00000516362 113 ntBASIC2.02□□□□□ -2.09
PHGDHO43175 CBX3P4-201ENST00000538909 354 ntBASIC2.02□□□□□ -2.09
PHGDHO43175 AC021506.2-201ENST00000612354 169 ntBASIC2.02□□□□□ -2.09
PHGDHO43175 Y_RNA.783-201ENST00000613546 102 ntBASIC2.02□□□□□ -2.09
PHGDHO43175 ZNF658B-202ENST00000615961 3375 ntBASIC2.01□□□□□ -2.09
PHGDHO43175 MIR526A2-201ENST00000390198 65 ntBASIC2.01□□□□□ -2.09
PHGDHO43175 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.01□□□□□ -2.09
PHGDHO43175 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
PHGDHO43175 SNRPGP10-201ENST00000432323 225 ntBASIC2.01□□□□□ -2.09
PHGDHO43175 Z98949.2-201ENST00000440996 144 ntBASIC2.01□□□□□ -2.09
PHGDHO43175 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.01□□□□□ -2.09
PHGDHO43175 AC107393.1-201ENST00000512403 346 ntBASIC2.01□□□□□ -2.09
PHGDHO43175 SCARNA8-201ENST00000515924 131 ntBASIC2.01□□□□□ -2.09
PHGDHO43175 IGKV3-31-201ENST00000523109 329 ntBASIC2.01□□□□□ -2.09
PHGDHO43175 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PHGDHO43175 RNU6-661P-201ENST00000362409 107 ntBASIC2□□□□□ -2.09
PHGDHO43175 RNU6-1209P-201ENST00000363655 107 ntBASIC2□□□□□ -2.09
PHGDHO43175 Y_RNA.796-201ENST00000364268 102 ntBASIC2□□□□□ -2.09
PHGDHO43175 Y_RNA.799-201ENST00000364992 102 ntBASIC2□□□□□ -2.09
PHGDHO43175 SNORA67.3-201ENST00000384366 140 ntBASIC2□□□□□ -2.09
PHGDHO43175 SNORA64-201ENST00000384674 134 ntBASIC2□□□□□ -2.09
PHGDHO43175 MIR676-201ENST00000390702 67 ntBASIC2□□□□□ -2.09
PHGDHO43175 SNORA12.1-201ENST00000390873 148 ntBASIC2□□□□□ -2.09
PHGDHO43175 RNU6-918P-201ENST00000391219 106 ntBASIC2□□□□□ -2.09
PHGDHO43175 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2□□□□□ -2.09
PHGDHO43175 RNU6-453P-201ENST00000516819 85 ntBASIC2□□□□□ -2.09
PHGDHO43175 SNORA81.3-201ENST00000517283 198 ntBASIC2□□□□□ -2.09
PHGDHO43175 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PHGDHO43175 RPL23AP91-201ENST00000569211 455 ntBASIC2□□□□□ -2.09
PHGDHO43175 MIR1273D-201ENST00000577266 86 ntBASIC2□□□□□ -2.09
PHGDHO43175 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
PHGDHO43175 SNRPGP19-201ENST00000603826 189 ntBASIC2□□□□□ -2.09
PHGDHO43175 uc_338.20-201ENST00000621563 178 ntBASIC2□□□□□ -2.09
PHGDHO43175 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PHGDHO43175 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PHGDHO43175 Y_RNA.793-201ENST00000411222 111 ntBASIC1.99□□□□□ -2.09
PHGDHO43175 RPL23AP42-201ENST00000471152 471 ntBASIC1.99□□□□□ -2.09
PHGDHO43175 AC099513.1-201ENST00000490423 301 ntBASIC1.99□□□□□ -2.09
PHGDHO43175 MRPS17P9-201ENST00000511924 393 ntBASIC1.99□□□□□ -2.09
PHGDHO43175 Y_RNA.714-201ENST00000517065 90 ntBASIC1.99□□□□□ -2.09
PHGDHO43175 MIR5089-201ENST00000580047 84 ntBASIC1.99□□□□□ -2.09
PHGDHO43175 MIR5688-201ENST00000580619 83 ntBASIC1.99□□□□□ -2.09
PHGDHO43175 AC004792.1-201ENST00000614523 137 ntBASIC1.99□□□□□ -2.09
PHGDHO43175 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.99□□□□□ -2.09
PHGDHO43175 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PHGDHO43175 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
PHGDHO43175 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.98□□□□□ -2.09
PHGDHO43175 Y_RNA.29-201ENST00000362570 113 ntBASIC1.98□□□□□ -2.09
PHGDHO43175 RNA5SP126-201ENST00000365092 109 ntBASIC1.98□□□□□ -2.09
PHGDHO43175 RNU4-17P-201ENST00000365598 141 ntBASIC1.98□□□□□ -2.09
PHGDHO43175 MT-TT-201ENST00000387460 66 ntBASIC1.98□□□□□ -2.09
PHGDHO43175 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PHGDHO43175 RNU6-131P-201ENST00000391144 107 ntBASIC1.98□□□□□ -2.09
PHGDHO43175 Z98742.3-201ENST00000418637 326 ntBASIC1.98□□□□□ -2.09
PHGDHO43175 CALM2P4-201ENST00000430810 426 ntBASIC1.98□□□□□ -2.09
PHGDHO43175 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.98□□□□□ -2.09
PHGDHO43175 AL138752.1-201ENST00000452964 351 ntBASIC1.98□□□□□ -2.09
PHGDHO43175 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PHGDHO43175 Y_RNA.229-201ENST00000364347 113 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 RNU6-203P-201ENST00000384038 104 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 SNORA70B-201ENST00000384210 135 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 Y_RNA.785-201ENST00000384290 109 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 MIR522-201ENST00000385071 87 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 RNA5SP496-201ENST00000391240 109 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 RNU6-381P-201ENST00000391259 108 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 MIR1267-201ENST00000408723 78 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 RNU2-2P-201ENST00000410396 191 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 RN7SKP51-201ENST00000410781 304 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 RNU2-64P-201ENST00000411315 191 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PHGDHO43175 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.97□□□□□ -2.09
PHGDHO43175 AC023449.1-201ENST00000454464 154 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 AC245047.8-201ENST00000456455 284 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 RN7SL274P-201ENST00000492268 272 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.97□□□□□ -2.09
PHGDHO43175 RNA5SP168-201ENST00000516642 112 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.97□□□□□ -2.09
PHGDHO43175 RNU2-4P-201ENST00000606190 192 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 AC103810.8-201ENST00000607347 118 ntBASIC1.97□□□□□ -2.09
PHGDHO43175 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PHGDHO43175 U8.2-201ENST00000363156 134 ntBASIC1.96□□□□□ -2.1
PHGDHO43175 RNU6-1020P-201ENST00000363684 107 ntBASIC1.96□□□□□ -2.1
PHGDHO43175 RNU6-424P-201ENST00000384367 105 ntBASIC1.96□□□□□ -2.1
PHGDHO43175 U8.16-201ENST00000391279 133 ntBASIC1.96□□□□□ -2.1
PHGDHO43175 SUMO2P12-201ENST00000405924 140 ntBASIC1.96□□□□□ -2.1
PHGDHO43175 SNORA3.2-201ENST00000408221 125 ntBASIC1.96□□□□□ -2.1
PHGDHO43175 SNORA11.2-201ENST00000408318 127 ntBASIC1.96□□□□□ -2.1
PHGDHO43175 RNU2-40P-201ENST00000410833 196 ntBASIC1.96□□□□□ -2.1
PHGDHO43175 JTBP1-201ENST00000441314 247 ntBASIC1.96□□□□□ -2.1
PHGDHO43175 MIR4762-201ENST00000585261 75 ntBASIC1.96□□□□□ -2.1
PHGDHO43175 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.96□□□□□ -2.1
PHGDHO43175 AL096840.1-201ENST00000603287 93 ntBASIC1.96□□□□□ -2.1
PHGDHO43175 MIR8074-201ENST00000615081 81 ntBASIC1.96□□□□□ -2.1
PHGDHO43175 AL513423.1-201ENST00000621695 132 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms