Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MIR125B2-201ENST00000385128 89 ntBASIC-0.08□□□□□ -2.42
CHD2O14647 RNU6-373P-201ENST00000411247 98 ntBASIC-0.08□□□□□ -2.42
CHD2O14647 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.08□□□□□ -2.42
CHD2O14647 AL353997.1-201ENST00000432936 108 ntBASIC-0.08□□□□□ -2.42
CHD2O14647 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.08□□□□□ -2.42
CHD2O14647 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.08□□□□□ -2.42
CHD2O14647 AC112693.2-201ENST00000556538 232 ntBASIC-0.08□□□□□ -2.42
CHD2O14647 MIR3612-201ENST00000579753 87 ntBASIC-0.08□□□□□ -2.42
CHD2O14647 MIR4290-201ENST00000583807 95 ntBASIC-0.08□□□□□ -2.42
CHD2O14647 NBR2-204ENST00000587322 63 ntBASIC-0.08□□□□□ -2.42
CHD2O14647 JPX_2.1-201ENST00000614161 69 ntBASIC-0.08□□□□□ -2.42
CHD2O14647 MIR873-201ENST00000401120 77 ntBASIC-0.09□□□□□ -2.42
CHD2O14647 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.09□□□□□ -2.42
CHD2O14647 AP001180.6-201ENST00000584918 159 ntBASIC-0.09□□□□□ -2.42
CHD2O14647 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.09□□□□□ -2.42
CHD2O14647 MIR1295B-201ENST00000636144 60 ntBASIC-0.09□□□□□ -2.42
CHD2O14647 AC090582.1-201ENST00000636321 199 ntBASIC-0.09□□□□□ -2.42
CHD2O14647 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 MIR570-201ENST00000384917 97 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 SEPT7P4-201ENST00000437076 306 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 snoU13.16-201ENST00000459350 104 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.1□□□□□ -2.43
CHD2O14647 AC093534.1-201ENST00000504977 132 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 RNU6-848P-201ENST00000515948 107 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 RNU6-617P-201ENST00000516147 107 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 RNU6-473P-201ENST00000516164 107 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 RNU2-12P-201ENST00000517216 168 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 MIR4431-201ENST00000579990 94 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 RNA5SP331-201ENST00000364986 107 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 SNORD38B-201ENST00000384690 67 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 RNU6-95P-201ENST00000384697 107 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 SNORD100-201ENST00000408573 76 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 RNU6-855P-201ENST00000410395 104 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 RNU7-102P-201ENST00000458948 62 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.1□□□□□ -2.43
CHD2O14647 SNORD38B-202ENST00000625943 69 ntBASIC-0.1□□□□□ -2.43
CHD2O14647 SNORA42.1-201ENST00000363515 137 ntBASIC-0.11□□□□□ -2.43
CHD2O14647 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.11□□□□□ -2.43
CHD2O14647 RNU6-842P-201ENST00000384269 107 ntBASIC-0.11□□□□□ -2.43
CHD2O14647 MIR610-201ENST00000385139 96 ntBASIC-0.11□□□□□ -2.43
CHD2O14647 SNORD28B-201ENST00000390993 75 ntBASIC-0.11□□□□□ -2.43
CHD2O14647 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.11□□□□□ -2.43
CHD2O14647 RPL17P19-201ENST00000489069 552 ntBASIC-0.11□□□□□ -2.43
CHD2O14647 AC019235.1-201ENST00000503847 207 ntBASIC-0.11□□□□□ -2.43
CHD2O14647 SNORA40.9-201ENST00000515895 93 ntBASIC-0.11□□□□□ -2.43
CHD2O14647 RNU6-436P-201ENST00000516171 114 ntBASIC-0.11□□□□□ -2.43
CHD2O14647 RNA5SP227-201ENST00000516184 113 ntBASIC-0.11□□□□□ -2.43
CHD2O14647 AL512360.1-201ENST00000555346 234 ntBASIC-0.11□□□□□ -2.43
CHD2O14647 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.11□□□□□ -2.43
CHD2O14647 AC005899.2-201ENST00000584353 90 ntBASIC-0.11□□□□□ -2.43
CHD2O14647 POLR3GP1-201ENST00000594073 261 ntBASIC-0.11□□□□□ -2.43
CHD2O14647 RNU6-961P-201ENST00000363893 105 ntBASIC-0.12□□□□□ -2.43
CHD2O14647 RNU6-923P-201ENST00000364753 107 ntBASIC-0.12□□□□□ -2.43
CHD2O14647 U8.7-201ENST00000364940 136 ntBASIC-0.12□□□□□ -2.43
CHD2O14647 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.12□□□□□ -2.43
CHD2O14647 MIR4771-2-201ENST00000577758 74 ntBASIC-0.12□□□□□ -2.43
CHD2O14647 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.12□□□□□ -2.43
CHD2O14647 MIR4771-1-201ENST00000582617 74 ntBASIC-0.12□□□□□ -2.43
CHD2O14647 MIR4791-201ENST00000607666 84 ntBASIC-0.12□□□□□ -2.43
CHD2O14647 MTND5P26-201ENST00000426018 1752 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 SNORD115-30-201ENST00000364117 82 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 RNU6-767P-201ENST00000384132 107 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 RNU6-710P-201ENST00000410424 105 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 RNU6-847P-201ENST00000411115 108 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 MTND2P9-201ENST00000422293 931 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHD2O14647 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHD2O14647 RNU6-956P-201ENST00000458868 103 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHD2O14647 MIR4493-201ENST00000584016 73 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 SNORA25.18-201ENST00000607153 114 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 AC004467.1-201ENST00000615678 330 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 U8.5-201ENST00000364528 136 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 SNORA8.3-201ENST00000384679 139 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
CHD2O14647 MIR892B-201ENST00000401279 77 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHD2O14647 PDCL2P1-201ENST00000419302 352 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 AL139396.1-201ENST00000421137 167 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 USP9YP30-201ENST00000430729 455 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 MTND2P22-201ENST00000444325 1033 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.13□□□□□ -2.43
CHD2O14647 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.13□□□□□ -2.43
CHD2O14647 SNORD92-201ENST00000585078 85 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 AC006441.5-201ENST00000612680 209 ntBASIC-0.13□□□□□ -2.43
CHD2O14647 SNORD95.1-201ENST00000364099 68 ntBASIC-0.14□□□□□ -2.43
CHD2O14647 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.14□□□□□ -2.43
CHD2O14647 SNORA72-201ENST00000384339 132 ntBASIC-0.14□□□□□ -2.43
CHD2O14647 SNORA75.6-201ENST00000391318 127 ntBASIC-0.14□□□□□ -2.43
CHD2O14647 SNORD12B-201ENST00000410433 91 ntBASIC-0.14□□□□□ -2.43
CHD2O14647 RNU6-602P-201ENST00000411155 105 ntBASIC-0.14□□□□□ -2.43
CHD2O14647 MCFD2P1-201ENST00000417812 300 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms