Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 RNU6-710P-201ENST00000410424 105 ntBASIC1.33□□□□□ -2.2
TRAFD1O14545 MLLT10P1-201ENST00000418346 262 ntBASIC1.33□□□□□ -2.2
TRAFD1O14545 RNU6-1116P-201ENST00000517269 99 ntBASIC1.33□□□□□ -2.2
TRAFD1O14545 AC019176.1-201ENST00000518519 225 ntBASIC1.33□□□□□ -2.2
TRAFD1O14545 MIR4778-201ENST00000577635 80 ntBASIC1.33□□□□□ -2.2
TRAFD1O14545 AC106754.2-201ENST00000623006 233 ntBASIC1.33□□□□□ -2.2
TRAFD1O14545 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
TRAFD1O14545 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRAFD1O14545 SNORD68-201ENST00000363214 84 ntBASIC1.32□□□□□ -2.2
TRAFD1O14545 Y_RNA.368-201ENST00000365547 113 ntBASIC1.32□□□□□ -2.2
TRAFD1O14545 Y_RNA.574-201ENST00000384766 95 ntBASIC1.32□□□□□ -2.2
TRAFD1O14545 SNORA26.5-201ENST00000391215 123 ntBASIC1.32□□□□□ -2.2
TRAFD1O14545 MTCO2P33-201ENST00000402100 465 ntBASIC1.32□□□□□ -2.2
TRAFD1O14545 MIR548F4-201ENST00000408515 105 ntBASIC1.32□□□□□ -2.2
TRAFD1O14545 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAFD1O14545 RNU6-1143P-201ENST00000516125 104 ntBASIC1.32□□□□□ -2.2
TRAFD1O14545 RNU2-31P-201ENST00000516954 155 ntBASIC1.32□□□□□ -2.2
TRAFD1O14545 AP002004.2-201ENST00000531656 154 ntBASIC1.32□□□□□ -2.2
TRAFD1O14545 AC024405.2-202ENST00000532731 184 ntBASIC1.32□□□□□ -2.2
TRAFD1O14545 POLR3GP1-201ENST00000594073 261 ntBASIC1.32□□□□□ -2.2
TRAFD1O14545 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.32□□□□□ -2.2
TRAFD1O14545 SNORA25.1-201ENST00000362326 128 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 Y_RNA.47-201ENST00000362697 108 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 RNA5SP259-201ENST00000365541 109 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 Y_RNA.456-201ENST00000384232 111 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 Y_RNA.483-201ENST00000384380 101 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 RNU6-950P-201ENST00000384651 107 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 MT-TW-201ENST00000387382 68 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 SNORA53-201ENST00000391141 249 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 U8.16-201ENST00000391279 133 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 RNU6-1203P-201ENST00000410703 110 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 AC004965.1-201ENST00000413033 213 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAFD1O14545 FTH1P12-201ENST00000432137 551 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 AC104332.1-201ENST00000440471 797 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 Z98949.2-201ENST00000440996 144 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 AC093850.1-201ENST00000454121 251 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 U8.19-201ENST00000459095 133 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 RNU7-141P-201ENST00000459304 62 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 TRBVB-201ENST00000477100 408 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 RPL23AP54-201ENST00000495129 419 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 AC091959.1-201ENST00000495857 238 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 OR9P1P-201ENST00000496431 281 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 RNU6-1338P-201ENST00000516328 91 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 RNU6-902P-201ENST00000517212 91 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 AL117187.1-201ENST00000555482 181 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 AL512605.2-201ENST00000592972 256 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAFD1O14545 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
TRAFD1O14545 AC068700.1-201ENST00000565862 3754 ntBASIC1.31□□□□□ -2.2
TRAFD1O14545 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
TRAFD1O14545 AL161722.3-201ENST00000605789 2983 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 Y_RNA.176-201ENST00000363815 109 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 Y_RNA.237-201ENST00000364439 102 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 Y_RNA.396-201ENST00000383949 103 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 RNU6-514P-201ENST00000384208 107 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 Y_RNA.461-201ENST00000384263 103 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 RNU6-1105P-201ENST00000384774 107 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 MIR513A1-201ENST00000385138 129 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 RNU6-763P-201ENST00000390865 106 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAFD1O14545 MIR1278-201ENST00000408753 81 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 PIGPP3-201ENST00000425307 415 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 PGBD4P5-201ENST00000445958 426 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 RNA5SP168-201ENST00000516642 112 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.3□□□□□ -2.2
TRAFD1O14545 AL591926.4-201ENST00000616895 298 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 AL353770.2-201ENST00000620024 78 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 SNORD3E-202ENST00000627253 216 ntBASIC1.3□□□□□ -2.2
TRAFD1O14545 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
TRAFD1O14545 MIR302D-201ENST00000362275 68 ntBASIC1.29□□□□□ -2.2
TRAFD1O14545 Y_RNA.136-201ENST00000363444 102 ntBASIC1.29□□□□□ -2.2
TRAFD1O14545 MIR194-1-201ENST00000384892 85 ntBASIC1.29□□□□□ -2.2
TRAFD1O14545 RNU11-5P-201ENST00000391216 129 ntBASIC1.29□□□□□ -2.2
TRAFD1O14545 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.29□□□□□ -2.2
TRAFD1O14545 AL161935.2-201ENST00000414627 60 ntBASIC1.29□□□□□ -2.2
TRAFD1O14545 AL358176.2-201ENST00000425769 204 ntBASIC1.29□□□□□ -2.2
TRAFD1O14545 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.29□□□□□ -2.2
TRAFD1O14545 RNU7-115P-201ENST00000516433 55 ntBASIC1.29□□□□□ -2.2
TRAFD1O14545 AC136628.3-201ENST00000521868 290 ntBASIC1.29□□□□□ -2.2
TRAFD1O14545 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAFD1O14545 AP001282.2-201ENST00000616149 309 ntBASIC1.29□□□□□ -2.2
TRAFD1O14545 MIR548AY-201ENST00000617669 107 ntBASIC1.29□□□□□ -2.2
TRAFD1O14545 MIR8062-201ENST00000621515 85 ntBASIC1.29□□□□□ -2.2
TRAFD1O14545 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
TRAFD1O14545 Y_RNA.117-201ENST00000363294 101 ntBASIC1.28□□□□□ -2.2
TRAFD1O14545 Y_RNA.253-201ENST00000364562 112 ntBASIC1.28□□□□□ -2.2
TRAFD1O14545 SNORA72.4-201ENST00000384174 132 ntBASIC1.28□□□□□ -2.2
TRAFD1O14545 BTF3P11-201ENST00000426582 477 ntBASIC1.28□□□□□ -2.2
TRAFD1O14545 RN7SKP179-201ENST00000516126 217 ntBASIC1.28□□□□□ -2.2
TRAFD1O14545 RNU6-1045P-201ENST00000516321 107 ntBASIC1.28□□□□□ -2.2
TRAFD1O14545 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAFD1O14545 AP001485.1-201ENST00000604799 199 ntBASIC1.28□□□□□ -2.2
TRAFD1O14545 PRR13P7-201ENST00000605538 430 ntBASIC1.28□□□□□ -2.2
TRAFD1O14545 AC037487.3-201ENST00000606668 112 ntBASIC1.28□□□□□ -2.2
TRAFD1O14545 SNORA28-201ENST00000606769 126 ntBASIC1.28□□□□□ -2.2
TRAFD1O14545 AL365434.2-201ENST00000607979 234 ntBASIC1.28□□□□□ -2.2
TRAFD1O14545 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms