Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RNU6-1065P-201ENST00000384513 106 ntBASIC1.37□□□□□ -2.19
O00370 Y_RNA.569-201ENST00000384749 103 ntBASIC1.37□□□□□ -2.19
O00370 SNORD115-46-201ENST00000390982 71 ntBASIC1.37□□□□□ -2.19
O00370 SNORA40.6-201ENST00000391153 128 ntBASIC1.37□□□□□ -2.19
O00370 U8.16-201ENST00000391279 133 ntBASIC1.37□□□□□ -2.19
O00370 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.37□□□□□ -2.19
O00370 RNU6-985P-201ENST00000410182 104 ntBASIC1.37□□□□□ -2.19
O00370 PIGPP3-201ENST00000425307 415 ntBASIC1.37□□□□□ -2.19
O00370 AC027119.1-201ENST00000440877 241 ntBASIC1.37□□□□□ -2.19
O00370 HSPE1P25-201ENST00000455484 251 ntBASIC1.37□□□□□ -2.19
O00370 AC117454.1-201ENST00000491120 168 ntBASIC1.37□□□□□ -2.19
O00370 RNU7-12P-201ENST00000516030 62 ntBASIC1.37□□□□□ -2.19
O00370 RNU6-496P-201ENST00000516145 99 ntBASIC1.37□□□□□ -2.19
O00370 RNA5SP168-201ENST00000516642 112 ntBASIC1.37□□□□□ -2.19
O00370 RNU6-1116P-201ENST00000517269 99 ntBASIC1.37□□□□□ -2.19
O00370 AC008269.2-201ENST00000561915 1105 ntBASIC1.37□□□□□ -2.19
O00370 AL162424.1-201ENST00000602325 221 ntBASIC1.37□□□□□ -2.19
O00370 RNU6-238P-201ENST00000363313 106 ntBASIC1.36□□□□□ -2.19
O00370 Y_RNA.326-201ENST00000365176 113 ntBASIC1.36□□□□□ -2.19
O00370 RNU6-713P-201ENST00000384761 107 ntBASIC1.36□□□□□ -2.19
O00370 RNA5SP482-201ENST00000391269 118 ntBASIC1.36□□□□□ -2.19
O00370 RPL23AP54-201ENST00000495129 419 ntBASIC1.36□□□□□ -2.19
O00370 OR9P1P-201ENST00000496431 281 ntBASIC1.36□□□□□ -2.19
O00370 AP003733.2-201ENST00000529409 171 ntBASIC1.36□□□□□ -2.19
O00370 POLR3GP1-201ENST00000594073 261 ntBASIC1.36□□□□□ -2.19
O00370 AC037487.3-201ENST00000606668 112 ntBASIC1.36□□□□□ -2.19
O00370 AL513423.1-201ENST00000621695 132 ntBASIC1.36□□□□□ -2.19
O00370 AC134026.1-201ENST00000623249 2239 ntBASIC1.36□□□□□ -2.19
O00370 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
O00370 SNORA25.1-201ENST00000362326 128 ntBASIC1.35□□□□□ -2.19
O00370 RNU6-290P-201ENST00000365212 101 ntBASIC1.35□□□□□ -2.19
O00370 Y_RNA.418-201ENST00000384029 102 ntBASIC1.35□□□□□ -2.19
O00370 RNU6-163P-201ENST00000384396 106 ntBASIC1.35□□□□□ -2.19
O00370 MIR194-1-201ENST00000384892 85 ntBASIC1.35□□□□□ -2.19
O00370 MIR660-201ENST00000385235 97 ntBASIC1.35□□□□□ -2.19
O00370 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.35□□□□□ -2.19
O00370 DYNLT3P2-201ENST00000442517 295 ntBASIC1.35□□□□□ -2.19
O00370 RNU6-635P-201ENST00000516651 102 ntBASIC1.35□□□□□ -2.19
O00370 AC090821.2-201ENST00000523552 176 ntBASIC1.35□□□□□ -2.19
O00370 AC024405.2-202ENST00000532731 184 ntBASIC1.35□□□□□ -2.19
O00370 AC015688.6-201ENST00000577737 104 ntBASIC1.35□□□□□ -2.19
O00370 AL591926.4-201ENST00000616895 298 ntBASIC1.35□□□□□ -2.19
O00370 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
O00370 Y_RNA.16-201ENST00000362421 102 ntBASIC1.34□□□□□ -2.19
O00370 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
O00370 Y_RNA.310-201ENST00000365063 113 ntBASIC1.34□□□□□ -2.19
O00370 SNORA25.9-201ENST00000365087 128 ntBASIC1.34□□□□□ -2.19
O00370 Y_RNA.456-201ENST00000384232 111 ntBASIC1.34□□□□□ -2.19
O00370 RNU6-424P-201ENST00000384367 105 ntBASIC1.34□□□□□ -2.19
O00370 Y_RNA.512-201ENST00000384518 102 ntBASIC1.34□□□□□ -2.19
O00370 Y_RNA.541-201ENST00000384640 113 ntBASIC1.34□□□□□ -2.19
O00370 RNU6-1105P-201ENST00000384774 107 ntBASIC1.34□□□□□ -2.19
O00370 MIR606-201ENST00000384851 96 ntBASIC1.34□□□□□ -2.19
O00370 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
O00370 Y_RNA.581-201ENST00000391017 97 ntBASIC1.34□□□□□ -2.19
O00370 SNORA53-201ENST00000391141 249 ntBASIC1.34□□□□□ -2.19
O00370 MTCO2P33-201ENST00000402100 465 ntBASIC1.34□□□□□ -2.19
O00370 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.34□□□□□ -2.19
O00370 AC092991.1-201ENST00000477176 376 ntBASIC1.34□□□□□ -2.19
O00370 RNU6-922P-201ENST00000516753 99 ntBASIC1.34□□□□□ -2.19
O00370 RNU7-28P-201ENST00000516759 62 ntBASIC1.34□□□□□ -2.19
O00370 SCARNA24.2-201ENST00000516968 130 ntBASIC1.34□□□□□ -2.19
O00370 AL512605.2-201ENST00000592972 256 ntBASIC1.34□□□□□ -2.19
O00370 MIR548AY-201ENST00000617669 107 ntBASIC1.34□□□□□ -2.19
O00370 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
O00370 snoU2_19.2-201ENST00000363024 80 ntBASIC1.33□□□□□ -2.2
O00370 Y_RNA.222-201ENST00000364264 102 ntBASIC1.33□□□□□ -2.2
O00370 Y_RNA.253-201ENST00000364562 112 ntBASIC1.33□□□□□ -2.2
O00370 Y_RNA.368-201ENST00000365547 113 ntBASIC1.33□□□□□ -2.2
O00370 Y_RNA.422-201ENST00000384054 114 ntBASIC1.33□□□□□ -2.2
O00370 SNORA72-201ENST00000384339 132 ntBASIC1.33□□□□□ -2.2
O00370 MIR499A-201ENST00000384903 122 ntBASIC1.33□□□□□ -2.2
O00370 RNU2-14P-201ENST00000411053 191 ntBASIC1.33□□□□□ -2.2
O00370 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.33□□□□□ -2.2
O00370 MTCO1P5-201ENST00000433573 344 ntBASIC1.33□□□□□ -2.2
O00370 AC104332.1-201ENST00000440471 797 ntBASIC1.33□□□□□ -2.2
O00370 Z98949.2-201ENST00000440996 144 ntBASIC1.33□□□□□ -2.2
O00370 HMGN1P10-201ENST00000474557 553 ntBASIC1.33□□□□□ -2.2
O00370 RN7SKP179-201ENST00000516126 217 ntBASIC1.33□□□□□ -2.2
O00370 Y_RNA.720-201ENST00000517166 92 ntBASIC1.33□□□□□ -2.2
O00370 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.33□□□□□ -2.2
O00370 Y_RNA.812-201ENST00000610788 101 ntBASIC1.33□□□□□ -2.2
O00370 Y_RNA.784-201ENST00000613803 101 ntBASIC1.33□□□□□ -2.2
O00370 AL157834.3-201ENST00000615543 103 ntBASIC1.33□□□□□ -2.2
O00370 Y_RNA.787-201ENST00000616522 101 ntBASIC1.33□□□□□ -2.2
O00370 Y_RNA.780-201ENST00000617336 101 ntBASIC1.33□□□□□ -2.2
O00370 Y_RNA.801-201ENST00000619005 101 ntBASIC1.33□□□□□ -2.2
O00370 AL353770.2-201ENST00000620024 78 ntBASIC1.33□□□□□ -2.2
O00370 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.33□□□□□ -2.2
O00370 U8.7-201ENST00000364940 136 ntBASIC1.32□□□□□ -2.2
O00370 RNU6-1248P-201ENST00000391096 64 ntBASIC1.32□□□□□ -2.2
O00370 SNX2P2-201ENST00000424553 323 ntBASIC1.32□□□□□ -2.2
O00370 RNU7-141P-201ENST00000459304 62 ntBASIC1.32□□□□□ -2.2
O00370 RNU6-1143P-201ENST00000516125 104 ntBASIC1.32□□□□□ -2.2
O00370 RNU6-191P-201ENST00000516295 94 ntBASIC1.32□□□□□ -2.2
O00370 CYP3A52P-201ENST00000563326 91 ntBASIC1.32□□□□□ -2.2
O00370 AC008737.2-201ENST00000599446 118 ntBASIC1.32□□□□□ -2.2
O00370 AC120024.3-201ENST00000603167 156 ntBASIC1.32□□□□□ -2.2
O00370 JPX_2.1-201ENST00000614161 69 ntBASIC1.32□□□□□ -2.2
O00370 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms