Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.47□□□□□ -1.85
H3BM21 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
H3BM21 RNU6-411P-201ENST00000384451 107 ntBASIC3.46□□□□□ -1.86
H3BM21 RNU11-5P-201ENST00000391216 129 ntBASIC3.46□□□□□ -1.86
H3BM21 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.46□□□□□ -1.86
H3BM21 RPS29P31-201ENST00000446147 164 ntBASIC3.46□□□□□ -1.86
H3BM21 U3.44-201ENST00000458938 192 ntBASIC3.46□□□□□ -1.86
H3BM21 RN7SL594P-201ENST00000470590 287 ntBASIC3.46□□□□□ -1.86
H3BM21 AP002884.2-201ENST00000471647 395 ntBASIC3.46□□□□□ -1.86
H3BM21 RNU6-341P-201ENST00000516973 96 ntBASIC3.46□□□□□ -1.86
H3BM21 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
H3BM21 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.46□□□□□ -1.86
H3BM21 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H3BM21 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
H3BM21 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.45□□□□□ -1.86
H3BM21 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.45□□□□□ -1.86
H3BM21 MFSD8-233ENST00000641482 4860 ntBASIC3.45□□□□□ -1.86
H3BM21 RNA5SP295-201ENST00000362655 121 ntBASIC3.45□□□□□ -1.86
H3BM21 RNU6-1244P-201ENST00000363614 108 ntBASIC3.45□□□□□ -1.86
H3BM21 SNORA38.1-201ENST00000364172 131 ntBASIC3.45□□□□□ -1.86
H3BM21 Y_RNA.386-201ENST00000383913 105 ntBASIC3.45□□□□□ -1.86
H3BM21 SNORA48.8-201ENST00000391324 134 ntBASIC3.45□□□□□ -1.86
H3BM21 HMGN2P34-201ENST00000437647 269 ntBASIC3.45□□□□□ -1.86
H3BM21 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.45□□□□□ -1.86
H3BM21 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.45□□□□□ -1.86
H3BM21 SCARNA18B-201ENST00000458806 135 ntBASIC3.45□□□□□ -1.86
H3BM21 RNU7-99P-201ENST00000516271 62 ntBASIC3.45□□□□□ -1.86
H3BM21 RNU6-1258P-201ENST00000516911 111 ntBASIC3.45□□□□□ -1.86
H3BM21 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.45□□□□□ -1.86
H3BM21 AP000867.2-201ENST00000532468 320 ntBASIC3.45□□□□□ -1.86
H3BM21 AC005000.2-201ENST00000605468 310 ntBASIC3.45□□□□□ -1.86
H3BM21 U2.20-201ENST00000613956 192 ntBASIC3.45□□□□□ -1.86
H3BM21 AC006111.3-201ENST00000622137 383 ntBASIC3.45□□□□□ -1.86
H3BM21 MIR6079-201ENST00000635807 62 ntBASIC3.45□□□□□ -1.86
H3BM21 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
H3BM21 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
H3BM21 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
H3BM21 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
H3BM21 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
H3BM21 RNU6-1084P-201ENST00000362498 107 ntBASIC3.44□□□□□ -1.86
H3BM21 SNORD115-2-201ENST00000362842 82 ntBASIC3.44□□□□□ -1.86
H3BM21 SNORD115-20-201ENST00000365099 82 ntBASIC3.44□□□□□ -1.86
H3BM21 RNU6-613P-201ENST00000410412 108 ntBASIC3.44□□□□□ -1.86
H3BM21 RNA5SP38-201ENST00000410750 119 ntBASIC3.44□□□□□ -1.86
H3BM21 RNA5SP120-201ENST00000410900 112 ntBASIC3.44□□□□□ -1.86
H3BM21 AC107083.1-201ENST00000439643 279 ntBASIC3.44□□□□□ -1.86
H3BM21 AL450471.1-201ENST00000447509 127 ntBASIC3.44□□□□□ -1.86
H3BM21 BX510359.1-201ENST00000456973 237 ntBASIC3.44□□□□□ -1.86
H3BM21 UBL5P1-201ENST00000507979 193 ntBASIC3.44□□□□□ -1.86
H3BM21 RNU6-998P-201ENST00000515894 101 ntBASIC3.44□□□□□ -1.86
H3BM21 SCARNA3-201ENST00000517097 143 ntBASIC3.44□□□□□ -1.86
H3BM21 RNU7-128P-201ENST00000517247 62 ntBASIC3.44□□□□□ -1.86
H3BM21 MIR4738-201ENST00000579134 87 ntBASIC3.44□□□□□ -1.86
H3BM21 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.44□□□□□ -1.86
H3BM21 AC092881.1-201ENST00000638218 2733 ntBASIC3.44□□□□□ -1.86
H3BM21 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
H3BM21 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.43□□□□□ -1.86
H3BM21 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
H3BM21 SNORD68-201ENST00000363214 84 ntBASIC3.43□□□□□ -1.86
H3BM21 SNORD38.1-201ENST00000363863 68 ntBASIC3.43□□□□□ -1.86
H3BM21 snoU2-30.1-201ENST00000365012 70 ntBASIC3.43□□□□□ -1.86
H3BM21 Y_RNA.470-201ENST00000384307 117 ntBASIC3.43□□□□□ -1.86
H3BM21 SNORA27-201ENST00000384323 126 ntBASIC3.43□□□□□ -1.86
H3BM21 RNU6-1274P-201ENST00000384557 107 ntBASIC3.43□□□□□ -1.86
H3BM21 MIR184-201ENST00000384962 84 ntBASIC3.43□□□□□ -1.86
H3BM21 SNORD17-201ENST00000390930 237 ntBASIC3.43□□□□□ -1.86
H3BM21 RN7SKP111-201ENST00000410349 271 ntBASIC3.43□□□□□ -1.86
H3BM21 AC097463.2-201ENST00000421074 142 ntBASIC3.43□□□□□ -1.86
H3BM21 AL445685.2-201ENST00000422551 342 ntBASIC3.43□□□□□ -1.86
H3BM21 AL049830.1-201ENST00000468034 425 ntBASIC3.43□□□□□ -1.86
H3BM21 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.43□□□□□ -1.86
H3BM21 RNU6-917P-201ENST00000516294 104 ntBASIC3.43□□□□□ -1.86
H3BM21 RNA5SP33-201ENST00000516687 98 ntBASIC3.43□□□□□ -1.86
H3BM21 RNU6-1015P-201ENST00000517121 99 ntBASIC3.43□□□□□ -1.86
H3BM21 RNVU1-4-201ENST00000612985 164 ntBASIC3.43□□□□□ -1.86
H3BM21 MIR3651-201ENST00000630427 90 ntBASIC3.43□□□□□ -1.86
H3BM21 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
H3BM21 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
H3BM21 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
H3BM21 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.43□□□□□ -1.86
H3BM21 SNORA1B-201ENST00000362535 133 ntBASIC3.42□□□□□ -1.86
H3BM21 AC005326.1-201ENST00000429197 123 ntBASIC3.42□□□□□ -1.86
H3BM21 RNU7-96P-201ENST00000459535 64 ntBASIC3.42□□□□□ -1.86
H3BM21 PHBP14-201ENST00000512887 367 ntBASIC3.42□□□□□ -1.86
H3BM21 SNORA25.13-201ENST00000516395 103 ntBASIC3.42□□□□□ -1.86
H3BM21 RNU7-153P-201ENST00000516455 62 ntBASIC3.42□□□□□ -1.86
H3BM21 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.42□□□□□ -1.86
H3BM21 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.42□□□□□ -1.86
H3BM21 AC026333.2-201ENST00000542164 106 ntBASIC3.42□□□□□ -1.86
H3BM21 ZNF861P-201ENST00000588126 639 ntBASIC3.42□□□□□ -1.86
H3BM21 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.42□□□□□ -1.86
H3BM21 MIR7153-201ENST00000637758 57 ntBASIC3.42□□□□□ -1.86
H3BM21 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.42□□□□□ -1.86
H3BM21 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
H3BM21 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
H3BM21 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
H3BM21 AP003122.5-201ENST00000527668 3766 ntBASIC3.41□□□□□ -1.86
H3BM21 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
H3BM21 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.41□□□□□ -1.86
H3BM21 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms