Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-1.22□□□□□ -2.61
COL6A5A8TX70 AC013262.1-201ENST00000426710 252 ntBASIC-1.22□□□□□ -2.61
COL6A5A8TX70 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.22□□□□□ -2.61
COL6A5A8TX70 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.22□□□□□ -2.61
COL6A5A8TX70 SNORA74.3-201ENST00000517108 154 ntBASIC-1.22□□□□□ -2.61
COL6A5A8TX70 MTND2P38-201ENST00000522536 667 ntBASIC-1.22□□□□□ -2.61
COL6A5A8TX70 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-1.22□□□□□ -2.61
COL6A5A8TX70 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-1.22□□□□□ -2.61
COL6A5A8TX70 AC010999.1-201ENST00000611856 324 ntBASIC-1.22□□□□□ -2.61
COL6A5A8TX70 AL049777.1-201ENST00000622740 518 ntBASIC-1.22□□□□□ -2.61
COL6A5A8TX70 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 RNU6-79P-201ENST00000362511 107 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 RNU6-1339P-201ENST00000363574 91 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 RNU4-50P-201ENST00000364361 141 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 AC106883.1-201ENST00000418805 562 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 RNU2-11P-201ENST00000459191 187 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 RPL7P42-201ENST00000481005 679 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-1.23□□□□□ -2.61
COL6A5A8TX70 ZNF971P-201ENST00000562068 1249 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 U6.108-201ENST00000637764 58 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 SNORA32.2-201ENST00000384049 122 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 RNA5SP237-201ENST00000410414 113 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.23□□□□□ -2.61
COL6A5A8TX70 AL359672.1-201ENST00000442302 409 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.23□□□□□ -2.61
COL6A5A8TX70 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 AC116353.2-201ENST00000505332 712 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 RNU6-1146P-201ENST00000516282 102 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 RNU2-10P-201ENST00000516375 211 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 RNU1-142P-201ENST00000516682 145 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 AC126544.2-201ENST00000625174 749 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.23□□□□□ -2.61
COL6A5A8TX70 MIR369-201ENST00000362155 70 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 MIR20A-201ENST00000362279 71 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 RNU6-1078P-201ENST00000364522 103 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-1.24□□□□□ -2.61
COL6A5A8TX70 AC090844.1-201ENST00000422019 156 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 RNU7-62P-201ENST00000458856 62 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 U8.19-201ENST00000459095 133 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.24□□□□□ -2.61
COL6A5A8TX70 AL136370.1-201ENST00000608166 691 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 AC063943.3-201ENST00000615562 356 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 RNU6-973P-201ENST00000364690 107 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 RNU6-476P-201ENST00000384726 107 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 RPS29P13-201ENST00000402041 169 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 MTND1P33-201ENST00000446251 917 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 RNU6-971P-201ENST00000516920 106 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 RNU6-856P-201ENST00000516959 98 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 AC110760.3-201ENST00000598794 467 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 SNORA28-201ENST00000606769 126 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 AC145423.2-201ENST00000610631 239 ntBASIC-1.24□□□□□ -2.61
COL6A5A8TX70 RNU6-212P-201ENST00000362642 104 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 RNU6-509P-201ENST00000363519 107 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 FABP5P15-201ENST00000453566 214 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 SNORA40.17-201ENST00000517256 115 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.25□□□□□ -2.61
COL6A5A8TX70 AC011374.2-201ENST00000607135 526 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 PART1_1.1-201ENST00000611761 217 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 U4.1-201ENST00000620349 87 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 RNU6-208P-201ENST00000362431 107 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 RNU6-424P-201ENST00000384367 105 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 RNU6-440P-201ENST00000390882 105 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 RNU2-54P-201ENST00000410299 190 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-1.25□□□□□ -2.61
COL6A5A8TX70 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.25□□□□□ -2.61
COL6A5A8TX70 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 RNU6-528P-201ENST00000516926 100 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 AC099785.1-201ENST00000605697 437 ntBASIC-1.25□□□□□ -2.61
COL6A5A8TX70 SNORD68-201ENST00000363214 84 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 RNU6-865P-201ENST00000364772 107 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 MIR19A-201ENST00000384878 82 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 AL354751.2-201ENST00000415471 210 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 HIGD1AP15-201ENST00000416198 280 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 AC084290.1-201ENST00000434995 374 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 RNU6-58P-201ENST00000517143 103 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 snoR1.1-201ENST00000628177 80 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 RNU6-766P-201ENST00000362478 107 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 RNU6-563P-201ENST00000364872 108 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 RNU6-131P-201ENST00000391144 107 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 AL592310.1-201ENST00000414330 671 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 MTND3P4-201ENST00000453537 303 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 AC120024.2-201ENST00000576526 175 ntBASIC-1.26□□□□□ -2.61
COL6A5A8TX70 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 RNU4-92P-201ENST00000363783 136 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 RNU6-188P-201ENST00000364207 107 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 RNU6-878P-201ENST00000384578 110 ntBASIC-1.27□□□□□ -2.61
COL6A5A8TX70 AL353691.2-201ENST00000443795 59 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms