Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 Y_RNA.777-201ENST00000516982 102 ntBASIC1.35□□□□□ -2.19
SRRM4A7MD48 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.35□□□□□ -2.19
SRRM4A7MD48 MIR4282-201ENST00000583613 67 ntBASIC1.35□□□□□ -2.19
SRRM4A7MD48 Y_RNA.771-201ENST00000598668 102 ntBASIC1.35□□□□□ -2.19
SRRM4A7MD48 AL008718.3-201ENST00000610217 321 ntBASIC1.35□□□□□ -2.19
SRRM4A7MD48 AL442067.1-201ENST00000613261 223 ntBASIC1.35□□□□□ -2.19
SRRM4A7MD48 Y_RNA.789-201ENST00000622480 102 ntBASIC1.35□□□□□ -2.19
SRRM4A7MD48 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SRRM4A7MD48 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.34□□□□□ -2.19
SRRM4A7MD48 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
SRRM4A7MD48 Y_RNA.172-201ENST00000363765 102 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 Y_RNA.200-201ENST00000364018 102 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 RNU6-200P-201ENST00000364743 107 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 MIR194-1-201ENST00000384892 85 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 MT-TR-201ENST00000387439 65 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 HSPE1P13-201ENST00000451143 297 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 SNORD2.1-201ENST00000458762 69 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.34□□□□□ -2.19
SRRM4A7MD48 RNU6-250P-201ENST00000516958 103 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 RNU6-341P-201ENST00000516973 96 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 AP002004.2-201ENST00000531656 154 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SRRM4A7MD48 AC015688.6-201ENST00000577737 104 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 AC011921.3-201ENST00000605540 361 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.34□□□□□ -2.19
SRRM4A7MD48 MIR6845-201ENST00000613182 61 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 AL513423.1-201ENST00000621695 132 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 MIR8063-201ENST00000621930 81 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 snoU18.1-201ENST00000629629 71 ntBASIC1.34□□□□□ -2.19
SRRM4A7MD48 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
SRRM4A7MD48 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SRRM4A7MD48 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SRRM4A7MD48 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SRRM4A7MD48 MIR126-201ENST00000362291 85 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 RNU6-801P-201ENST00000364087 105 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 Y_RNA.292-201ENST00000364904 97 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 Y_RNA.310-201ENST00000365063 113 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 SNORA4.2-201ENST00000365313 147 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 Y_RNA.341-201ENST00000365341 102 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 Y_RNA.368-201ENST00000365547 113 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 RNU6-211P-201ENST00000384047 107 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 SNORD116-13-201ENST00000384408 92 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 RNU6-763P-201ENST00000390865 106 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 SNORA26.5-201ENST00000391215 123 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 Y_RNA.626-201ENST00000411288 95 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 MTND5P15-201ENST00000434246 349 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 Z98949.2-201ENST00000440996 144 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 U8.19-201ENST00000459095 133 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 Y_RNA.638-201ENST00000459374 113 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 Y_RNA.637-201ENST00000459424 114 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 AC005908.1-201ENST00000468701 347 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 RNU6-1337P-201ENST00000516525 95 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 RNU2-56P-201ENST00000516826 190 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.33□□□□□ -2.2
SRRM4A7MD48 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.33□□□□□ -2.2
SRRM4A7MD48 AL929325.1-201ENST00000603096 117 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 AC073349.3-201ENST00000617616 186 ntBASIC1.33□□□□□ -2.2
SRRM4A7MD48 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.33□□□□□ -2.2
SRRM4A7MD48 AC134026.1-201ENST00000623249 2239 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
SRRM4A7MD48 MIR411-201ENST00000362239 96 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 MIR302D-201ENST00000362275 68 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 Y_RNA.83-201ENST00000363005 113 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 Y_RNA.199-201ENST00000364014 102 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 RNU6-1048P-201ENST00000364054 107 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 Y_RNA.297-201ENST00000364950 91 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 SNORD1A-201ENST00000364968 72 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 RNY4P28-201ENST00000365281 93 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 SNORA72.4-201ENST00000384174 132 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 RNA5SP482-201ENST00000391269 118 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.32□□□□□ -2.2
SRRM4A7MD48 snoU13.23-201ENST00000458863 104 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 RNU6-63P-201ENST00000516690 95 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 AC136628.3-201ENST00000521868 290 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 AC024405.2-202ENST00000532731 184 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 AC004832.4-201ENST00000608952 331 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 AL121890.5-201ENST00000620848 304 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 MIR7843-201ENST00000622274 79 ntBASIC1.32□□□□□ -2.2
SRRM4A7MD48 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SRRM4A7MD48 Y_RNA.265-201ENST00000364677 108 ntBASIC1.31□□□□□ -2.2
SRRM4A7MD48 RNA5SP363-201ENST00000365072 115 ntBASIC1.31□□□□□ -2.2
SRRM4A7MD48 Y_RNA.456-201ENST00000384232 111 ntBASIC1.31□□□□□ -2.2
SRRM4A7MD48 MIR513A1-201ENST00000385138 129 ntBASIC1.31□□□□□ -2.2
SRRM4A7MD48 MTCO2P33-201ENST00000402100 465 ntBASIC1.31□□□□□ -2.2
SRRM4A7MD48 SNX2P2-201ENST00000424553 323 ntBASIC1.31□□□□□ -2.2
SRRM4A7MD48 RPS20P10-201ENST00000451209 253 ntBASIC1.31□□□□□ -2.2
SRRM4A7MD48 RNU6-970P-201ENST00000516312 107 ntBASIC1.31□□□□□ -2.2
SRRM4A7MD48 RNU6-295P-201ENST00000516901 104 ntBASIC1.31□□□□□ -2.2
SRRM4A7MD48 DEFB122-202ENST00000569013 197 ntBASIC1.31□□□□□ -2.2
SRRM4A7MD48 AC021506.2-201ENST00000612354 169 ntBASIC1.31□□□□□ -2.2
SRRM4A7MD48 AL078604.3-201ENST00000615580 211 ntBASIC1.31□□□□□ -2.2
SRRM4A7MD48 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.31□□□□□ -2.2
SRRM4A7MD48 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.31□□□□□ -2.2
SRRM4A7MD48 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SRRM4A7MD48 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SRRM4A7MD48 AC068700.1-201ENST00000565862 3754 ntBASIC1.31□□□□□ -2.2
SRRM4A7MD48 RNU6-117P-201ENST00000365415 107 ntBASIC1.3□□□□□ -2.2
SRRM4A7MD48 RNU6-203P-201ENST00000384038 104 ntBASIC1.3□□□□□ -2.2
SRRM4A7MD48 Y_RNA.785-201ENST00000384290 109 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms