Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AL034345.1-201ENST00000407768 123 ntBASIC1.67□□□□□ -2.14
IGHV4-28A0A0C4DH34 MIR548I3-201ENST00000408378 149 ntBASIC1.67□□□□□ -2.14
IGHV4-28A0A0C4DH34 MIR548I1-201ENST00000408810 149 ntBASIC1.67□□□□□ -2.14
IGHV4-28A0A0C4DH34 snoU13.27-201ENST00000459278 104 ntBASIC1.67□□□□□ -2.14
IGHV4-28A0A0C4DH34 MIR4709-201ENST00000577272 72 ntBASIC1.67□□□□□ -2.14
IGHV4-28A0A0C4DH34 FO624990.1-201ENST00000636373 85 ntBASIC1.67□□□□□ -2.14
IGHV4-28A0A0C4DH34 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
IGHV4-28A0A0C4DH34 ICE2P2-201ENST00000483823 2787 ntBASIC1.66□□□□□ -2.14
IGHV4-28A0A0C4DH34 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNU1-138P-201ENST00000384093 164 ntBASIC1.66□□□□□ -2.14
IGHV4-28A0A0C4DH34 RNU6-1031P-201ENST00000384773 107 ntBASIC1.66□□□□□ -2.14
IGHV4-28A0A0C4DH34 SNORA3.2-201ENST00000408221 125 ntBASIC1.66□□□□□ -2.14
IGHV4-28A0A0C4DH34 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.66□□□□□ -2.14
IGHV4-28A0A0C4DH34 AL121914.1-201ENST00000450188 156 ntBASIC1.66□□□□□ -2.14
IGHV4-28A0A0C4DH34 SCARNA16.3-201ENST00000516595 184 ntBASIC1.66□□□□□ -2.14
IGHV4-28A0A0C4DH34 Y_RNA.714-201ENST00000517065 90 ntBASIC1.66□□□□□ -2.14
IGHV4-28A0A0C4DH34 MRPS18CP4-201ENST00000535821 231 ntBASIC1.66□□□□□ -2.14
IGHV4-28A0A0C4DH34 MIR4298-201ENST00000584380 73 ntBASIC1.66□□□□□ -2.14
IGHV4-28A0A0C4DH34 MIR6873-201ENST00000622788 63 ntBASIC1.66□□□□□ -2.14
IGHV4-28A0A0C4DH34 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
IGHV4-28A0A0C4DH34 ZNF658B-202ENST00000615961 3375 ntBASIC1.65□□□□□ -2.14
IGHV4-28A0A0C4DH34 MIR21-201ENST00000362134 72 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 U8.2-201ENST00000363156 134 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 U8.5-201ENST00000364528 136 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-728P-201ENST00000365375 104 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNY3P5-201ENST00000384127 102 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR15B-201ENST00000385045 98 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNA5SP212-201ENST00000391223 107 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNA5SP425-201ENST00000410336 112 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC009310.1-201ENST00000414414 451 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 Z98742.3-201ENST00000418637 326 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 CALM2P4-201ENST00000430810 426 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 FTH1P12-201ENST00000432137 551 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU7-149P-201ENST00000516739 59 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-1116P-201ENST00000517269 99 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR5007-201ENST00000583098 95 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR4762-201ENST00000585261 75 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 AL773524.1-201ENST00000614065 229 ntBASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
IGHV4-28A0A0C4DH34 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-1084P-201ENST00000362498 107 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 SNORD45.3-201ENST00000363836 72 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 SNORA6-201ENST00000384033 151 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 SNORA70B-201ENST00000384210 135 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 SNORD72-201ENST00000390994 80 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU5E-9P-201ENST00000411164 104 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC244636.1-201ENST00000421152 228 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 AL356320.1-201ENST00000429616 163 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 SEPT7P4-201ENST00000437076 306 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 SNRPGP8-201ENST00000454064 226 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 MRPS17P9-201ENST00000511924 393 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 SNORD77.4-201ENST00000516158 81 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC021506.2-201ENST00000612354 169 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR6895-201ENST00000613497 78 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 Pinc.1-201ENST00000616452 154 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC008555.8-201ENST00000623602 2168 ntBASIC1.64□□□□□ -2.15
IGHV4-28A0A0C4DH34 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIRLET7C-201ENST00000362160 84 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 Y_RNA.23-201ENST00000362496 106 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 Y_RNA.180-201ENST00000363867 113 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-312P-201ENST00000364629 107 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 SNORD50B-201ENST00000364995 70 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-163P-201ENST00000384396 106 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR17-201ENST00000385012 84 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR802-201ENST00000390235 94 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 U8.16-201ENST00000391279 133 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 RN7SKP192-201ENST00000411291 327 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC099513.1-201ENST00000490423 301 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-1299P-201ENST00000516316 100 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNA5SP168-201ENST00000516642 112 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR4299-201ENST00000577899 72 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC008507.4-201ENST00000585464 127 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR6766-201ENST00000622641 72 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR203B-201ENST00000636080 86 ntBASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 AL596028.1-201ENST00000326971 197 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-484P-201ENST00000384016 107 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 Y_RNA.432-201ENST00000384087 111 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-439P-201ENST00000384188 106 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-424P-201ENST00000384367 105 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR221-201ENST00000385135 110 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms