Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC133561.1-201ENST00000568600 2415 ntBASIC31.32■■■□□ 2.6
IFT140Q96RY7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
IFT140Q96RY7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC31.32■■■□□ 2.6
IFT140Q96RY7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
IFT140Q96RY7 MED15P5-201ENST00000423150 992 ntBASIC31.32■■■□□ 2.6
IFT140Q96RY7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC31.32■■■□□ 2.6
IFT140Q96RY7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC31.32■■■□□ 2.6
IFT140Q96RY7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC31.32■■■□□ 2.6
IFT140Q96RY7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC31.32■■■□□ 2.6
IFT140Q96RY7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC31.32■■■□□ 2.6
IFT140Q96RY7 AL691432.2-201ENST00000607222 2038 ntBASIC31.32■■■□□ 2.6
IFT140Q96RY7 AL353692.3-201ENST00000407031 1396 ntBASIC31.32■■■□□ 2.6
IFT140Q96RY7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
IFT140Q96RY7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
IFT140Q96RY7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
IFT140Q96RY7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
IFT140Q96RY7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC31.31■■■□□ 2.6
IFT140Q96RY7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
IFT140Q96RY7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
IFT140Q96RY7 AC004967.1-201ENST00000453589 447 ntBASIC31.31■■■□□ 2.6
IFT140Q96RY7 AC034105.1-201ENST00000563488 319 ntBASIC31.31■■■□□ 2.6
IFT140Q96RY7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC31.31■■■□□ 2.6
IFT140Q96RY7 AL356488.2-201ENST00000602755 427 ntBASIC31.31■■■□□ 2.6
IFT140Q96RY7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
IFT140Q96RY7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
IFT140Q96RY7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
IFT140Q96RY7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
IFT140Q96RY7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
IFT140Q96RY7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
IFT140Q96RY7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
IFT140Q96RY7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
IFT140Q96RY7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
IFT140Q96RY7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC31.3■■■□□ 2.6
IFT140Q96RY7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
IFT140Q96RY7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
IFT140Q96RY7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC31.3■■■□□ 2.6
IFT140Q96RY7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC31.3■■■□□ 2.6
IFT140Q96RY7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
IFT140Q96RY7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC31.3■■■□□ 2.6
IFT140Q96RY7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
IFT140Q96RY7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC31.3■■■□□ 2.6
IFT140Q96RY7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC31.3■■■□□ 2.6
IFT140Q96RY7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
IFT140Q96RY7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
IFT140Q96RY7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
IFT140Q96RY7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
IFT140Q96RY7 YBX2P1-201ENST00000394192 760 ntBASIC31.29■■■□□ 2.6
IFT140Q96RY7 RBM17P3-201ENST00000417687 1192 ntBASIC31.29■■■□□ 2.6
IFT140Q96RY7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC31.29■■■□□ 2.6
IFT140Q96RY7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
IFT140Q96RY7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
IFT140Q96RY7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
IFT140Q96RY7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
IFT140Q96RY7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
IFT140Q96RY7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
IFT140Q96RY7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
IFT140Q96RY7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC31.29■■■□□ 2.6
IFT140Q96RY7 RCC2P3-201ENST00000418112 1537 ntBASIC31.29■■■□□ 2.6
IFT140Q96RY7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
IFT140Q96RY7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
IFT140Q96RY7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
IFT140Q96RY7 AC104109.2-201ENST00000602919 1418 ntBASIC31.28■■■□□ 2.6
IFT140Q96RY7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
IFT140Q96RY7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC31.28■■■□□ 2.6
IFT140Q96RY7 AL591424.1-201ENST00000442569 1213 ntBASIC31.28■■■□□ 2.6
IFT140Q96RY7 AC011840.4-201ENST00000578471 627 ntBASIC31.28■■■□□ 2.6
IFT140Q96RY7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
IFT140Q96RY7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
IFT140Q96RY7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC31.28■■■□□ 2.6
IFT140Q96RY7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
IFT140Q96RY7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
IFT140Q96RY7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
IFT140Q96RY7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
IFT140Q96RY7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
IFT140Q96RY7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC31.27■■■□□ 2.6
IFT140Q96RY7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC31.27■■■□□ 2.6
IFT140Q96RY7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC31.27■■■□□ 2.6
IFT140Q96RY7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC31.27■■■□□ 2.6
IFT140Q96RY7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
IFT140Q96RY7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC31.27■■■□□ 2.6
IFT140Q96RY7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC31.27■■■□□ 2.6
IFT140Q96RY7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
IFT140Q96RY7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
IFT140Q96RY7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC31.27■■■□□ 2.6
IFT140Q96RY7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC31.27■■■□□ 2.6
IFT140Q96RY7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
IFT140Q96RY7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
IFT140Q96RY7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.6
IFT140Q96RY7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC31.26■■■□□ 2.59
IFT140Q96RY7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
IFT140Q96RY7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
IFT140Q96RY7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
IFT140Q96RY7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC31.26■■■□□ 2.59
IFT140Q96RY7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC31.26■■■□□ 2.59
IFT140Q96RY7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
IFT140Q96RY7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
IFT140Q96RY7 AC008556.1-201ENST00000610908 2040 ntBASIC31.25■■■□□ 2.59
IFT140Q96RY7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC31.25■■■□□ 2.59
IFT140Q96RY7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
IFT140Q96RY7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms