Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga4Q91XY4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Gm18669-201ENSMUST00000216049 778 ntBASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga4Q91XY4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Mir3081-201ENSMUST00000175305 84 ntBASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhga4Q91XY4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Gm10819-201ENSMUST00000099988 561 ntBASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhga4Q91XY4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms