Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdh18Q8VHR0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Gm22240-201ENSMUST00000175225 82 ntBASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh18Q8VHR0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Il3ra-202ENSMUST00000223589 738 ntBASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh18Q8VHR0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh18Q8VHR0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 130.2 ms