Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rp1l1Q8CGM2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Mir6977-201ENSMUST00000184960 64 ntBASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rp1l1Q8CGM2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Gm25287-201ENSMUST00000103846 110 ntBASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Gm22918-201ENSMUST00000103855 110 ntBASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rp1l1Q8CGM2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rp1l1Q8CGM2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Gm15693-201ENSMUST00000120470 637 ntBASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rp1l1Q8CGM2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rp1l1Q8CGM2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Rp1l1Q8CGM2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rp1l1Q8CGM2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rp1l1Q8CGM2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rp1l1Q8CGM2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Rp1l1Q8CGM2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rp1l1Q8CGM2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rp1l1Q8CGM2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.52■□□□□ 0.24
Rp1l1Q8CGM2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rp1l1Q8CGM2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rp1l1Q8CGM2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms