Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.54■□□□□ 0.08
SynpoQ8CC35 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SynpoQ8CC35 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.54■□□□□ 0.08
SynpoQ8CC35 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SynpoQ8CC35 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
SynpoQ8CC35 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.53■□□□□ 0.08
SynpoQ8CC35 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.53■□□□□ 0.08
SynpoQ8CC35 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SynpoQ8CC35 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SynpoQ8CC35 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.52■□□□□ 0.08
SynpoQ8CC35 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SynpoQ8CC35 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SynpoQ8CC35 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.52■□□□□ 0.08
SynpoQ8CC35 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SynpoQ8CC35 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SynpoQ8CC35 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.52■□□□□ 0.08
SynpoQ8CC35 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SynpoQ8CC35 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.52■□□□□ 0.08
SynpoQ8CC35 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SynpoQ8CC35 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SynpoQ8CC35 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SynpoQ8CC35 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SynpoQ8CC35 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SynpoQ8CC35 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.52■□□□□ 0.07
SynpoQ8CC35 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SynpoQ8CC35 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SynpoQ8CC35 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SynpoQ8CC35 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.52■□□□□ 0.07
SynpoQ8CC35 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SynpoQ8CC35 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SynpoQ8CC35 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SynpoQ8CC35 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.51■□□□□ 0.07
SynpoQ8CC35 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Gm18115-201ENSMUST00000221209 621 ntBASIC15.51■□□□□ 0.07
SynpoQ8CC35 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SynpoQ8CC35 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SynpoQ8CC35 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms