Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf38Q8BI21 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf38Q8BI21 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf38Q8BI21 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf38Q8BI21 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.52■□□□□ 0.08
Rnf38Q8BI21 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf38Q8BI21 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf38Q8BI21 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf38Q8BI21 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf38Q8BI21 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Rnf38Q8BI21 Gm7213-201ENSMUST00000215977 950 ntBASIC15.52■□□□□ 0.08
Rnf38Q8BI21 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf38Q8BI21 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rnf38Q8BI21 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf38Q8BI21 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf38Q8BI21 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf38Q8BI21 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.52■□□□□ 0.07
Rnf38Q8BI21 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Rnf38Q8BI21 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf38Q8BI21 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.52■□□□□ 0.07
Rnf38Q8BI21 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Rnf38Q8BI21 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf38Q8BI21 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf38Q8BI21 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Rnf38Q8BI21 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf38Q8BI21 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf38Q8BI21 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Gm2274-201ENSMUST00000184539 609 ntBASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.5■□□□□ 0.07
Rnf38Q8BI21 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf38Q8BI21 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Gm29707-201ENSMUST00000196325 491 ntBASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf38Q8BI21 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf38Q8BI21 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms