Protein–RNA interactions for Protein: Q8BHD0

Rab39a, Ras-related protein Rab-39A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39aQ8BHD0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Gm15565-201ENSMUST00000118890 427 ntBASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Gm27463-201ENSMUST00000183569 57 ntBASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Gm9731-201ENSMUST00000209480 747 ntBASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rab39aQ8BHD0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Gm17661-201ENSMUST00000170317 270 ntBASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab39aQ8BHD0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Gm7791-201ENSMUST00000219066 539 ntBASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Rab39aQ8BHD0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab39aQ8BHD0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rab39aQ8BHD0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rab39aQ8BHD0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rab39aQ8BHD0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rab39aQ8BHD0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rab39aQ8BHD0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rab39aQ8BHD0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rab39aQ8BHD0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.83□□□□□ -0.04
Rab39aQ8BHD0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rab39aQ8BHD0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms