Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Satb1Q60611 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.61■□□□□ 0.25
Satb1Q60611 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Satb1Q60611 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.61■□□□□ 0.25
Satb1Q60611 Gm27321-201ENSMUST00000185021 205 ntBASIC16.61■□□□□ 0.25
Satb1Q60611 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Satb1Q60611 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Satb1Q60611 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Satb1Q60611 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Satb1Q60611 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Satb1Q60611 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Satb1Q60611 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Satb1Q60611 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Satb1Q60611 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Satb1Q60611 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Satb1Q60611 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Satb1Q60611 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.6■□□□□ 0.25
Satb1Q60611 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Satb1Q60611 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.6■□□□□ 0.25
Satb1Q60611 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Satb1Q60611 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Satb1Q60611 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Satb1Q60611 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Satb1Q60611 Gm25911-201ENSMUST00000157621 56 ntBASIC16.6■□□□□ 0.25
Satb1Q60611 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.6■□□□□ 0.25
Satb1Q60611 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.6■□□□□ 0.25
Satb1Q60611 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.6■□□□□ 0.25
Satb1Q60611 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Satb1Q60611 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.6■□□□□ 0.25
Satb1Q60611 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Satb1Q60611 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.6■□□□□ 0.25
Satb1Q60611 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Satb1Q60611 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Satb1Q60611 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Satb1Q60611 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Satb1Q60611 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Satb1Q60611 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Satb1Q60611 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Satb1Q60611 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Gm25990-201ENSMUST00000102440 86 ntBASIC16.59■□□□□ 0.25
Satb1Q60611 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.59■□□□□ 0.25
Satb1Q60611 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.59■□□□□ 0.25
Satb1Q60611 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Satb1Q60611 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.59■□□□□ 0.25
Satb1Q60611 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.59■□□□□ 0.25
Satb1Q60611 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.59■□□□□ 0.25
Satb1Q60611 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.59■□□□□ 0.25
Satb1Q60611 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Satb1Q60611 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Satb1Q60611 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Satb1Q60611 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
Satb1Q60611 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Satb1Q60611 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Satb1Q60611 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Satb1Q60611 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Satb1Q60611 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Satb1Q60611 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Satb1Q60611 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.58■□□□□ 0.24
Satb1Q60611 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Satb1Q60611 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.58■□□□□ 0.24
Satb1Q60611 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 Gm44872-201ENSMUST00000207864 420 ntBASIC16.58■□□□□ 0.24
Satb1Q60611 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Satb1Q60611 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.58■□□□□ 0.24
Satb1Q60611 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.58■□□□□ 0.24
Satb1Q60611 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Satb1Q60611 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms