Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shank3Q4ACU6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shank3Q4ACU6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.87■□□□□ 0.77
Shank3Q4ACU6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shank3Q4ACU6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shank3Q4ACU6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shank3Q4ACU6 Mir449b-201ENSMUST00000104833 80 ntBASIC19.87■□□□□ 0.77
Shank3Q4ACU6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.87■□□□□ 0.77
Shank3Q4ACU6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shank3Q4ACU6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Shank3Q4ACU6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Shank3Q4ACU6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Shank3Q4ACU6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shank3Q4ACU6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shank3Q4ACU6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Shank3Q4ACU6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Gm9385-201ENSMUST00000117563 472 ntBASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.85■□□□□ 0.77
Shank3Q4ACU6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shank3Q4ACU6 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shank3Q4ACU6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Shank3Q4ACU6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.84■□□□□ 0.77
Shank3Q4ACU6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.84■□□□□ 0.77
Shank3Q4ACU6 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.84■□□□□ 0.77
Shank3Q4ACU6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shank3Q4ACU6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shank3Q4ACU6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shank3Q4ACU6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.84■□□□□ 0.77
Shank3Q4ACU6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shank3Q4ACU6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shank3Q4ACU6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shank3Q4ACU6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shank3Q4ACU6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shank3Q4ACU6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shank3Q4ACU6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Shank3Q4ACU6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Shank3Q4ACU6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Shank3Q4ACU6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Shank3Q4ACU6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shank3Q4ACU6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shank3Q4ACU6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shank3Q4ACU6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Shank3Q4ACU6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.82■□□□□ 0.76
Shank3Q4ACU6 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Gm13223-201ENSMUST00000118609 747 ntBASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shank3Q4ACU6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Shank3Q4ACU6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms