Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC022616.7-201ENST00000525383 220 ntBASIC19.87■□□□□ 0.77
USP46P62068 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.87■□□□□ 0.77
USP46P62068 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.87■□□□□ 0.77
USP46P62068 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
USP46P62068 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.87■□□□□ 0.77
USP46P62068 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.87■□□□□ 0.77
USP46P62068 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
USP46P62068 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP46P62068 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP46P62068 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP46P62068 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP46P62068 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
USP46P62068 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP46P62068 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.86■□□□□ 0.77
USP46P62068 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP46P62068 RNF152P1-201ENST00000397754 604 ntBASIC19.86■□□□□ 0.77
USP46P62068 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.86■□□□□ 0.77
USP46P62068 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.86■□□□□ 0.77
USP46P62068 AL441883.1-201ENST00000566170 1045 ntBASIC19.86■□□□□ 0.77
USP46P62068 AL512604.3-201ENST00000569583 964 ntBASIC19.86■□□□□ 0.77
USP46P62068 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.86■□□□□ 0.77
USP46P62068 CR769767.2-201ENST00000622735 460 ntBASIC19.86■□□□□ 0.77
USP46P62068 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP46P62068 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.86■□□□□ 0.77
USP46P62068 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
USP46P62068 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP46P62068 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP46P62068 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
USP46P62068 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.85■□□□□ 0.77
USP46P62068 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.85■□□□□ 0.77
USP46P62068 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
USP46P62068 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP46P62068 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
USP46P62068 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP46P62068 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP46P62068 TSPY5P-201ENST00000426936 936 ntBASIC19.85■□□□□ 0.77
USP46P62068 AC009947.2-201ENST00000444014 672 ntBASIC19.85■□□□□ 0.77
USP46P62068 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.85■□□□□ 0.77
USP46P62068 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP46P62068 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.85■□□□□ 0.77
USP46P62068 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP46P62068 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.85■□□□□ 0.77
USP46P62068 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP46P62068 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP46P62068 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP46P62068 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP46P62068 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP46P62068 IRX1P1-201ENST00000438849 1838 ntBASIC19.85■□□□□ 0.77
USP46P62068 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.85■□□□□ 0.77
USP46P62068 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP46P62068 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.85■□□□□ 0.77
USP46P62068 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.85■□□□□ 0.77
USP46P62068 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP46P62068 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP46P62068 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP46P62068 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP46P62068 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.84■□□□□ 0.77
USP46P62068 LETM1P2-201ENST00000597330 2178 ntBASIC19.84■□□□□ 0.77
USP46P62068 AL032819.2-201ENST00000624543 2162 ntBASIC19.84■□□□□ 0.77
USP46P62068 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
USP46P62068 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP46P62068 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP46P62068 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.84■□□□□ 0.77
USP46P62068 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP46P62068 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP46P62068 AL023284.2-201ENST00000405850 579 ntBASIC19.84■□□□□ 0.77
USP46P62068 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP46P62068 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.84■□□□□ 0.77
USP46P62068 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.84■□□□□ 0.77
USP46P62068 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
USP46P62068 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.84■□□□□ 0.77
USP46P62068 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP46P62068 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP46P62068 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
USP46P62068 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP46P62068 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.84■□□□□ 0.77
USP46P62068 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
USP46P62068 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP46P62068 KRT8P3-201ENST00000519669 1449 ntBASIC19.84■□□□□ 0.77
USP46P62068 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP46P62068 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP46P62068 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.83■□□□□ 0.77
USP46P62068 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
USP46P62068 AC141586.3-201ENST00000562166 1838 ntBASIC19.83■□□□□ 0.77
USP46P62068 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.83■□□□□ 0.77
USP46P62068 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
USP46P62068 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.83■□□□□ 0.77
USP46P62068 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.83■□□□□ 0.77
USP46P62068 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.83■□□□□ 0.77
USP46P62068 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP46P62068 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP46P62068 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms