Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cxcl1P12850 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cxcl1P12850 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cxcl1P12850 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.31□□□□□ -0.28
Cxcl1P12850 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.31□□□□□ -0.28
Cxcl1P12850 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cxcl1P12850 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Cxcl1P12850 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cxcl1P12850 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cxcl1P12850 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl1P12850 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Cxcl1P12850 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.3□□□□□ -0.28
Cxcl1P12850 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cxcl1P12850 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cxcl1P12850 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.3□□□□□ -0.28
Cxcl1P12850 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.3□□□□□ -0.28
Cxcl1P12850 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.3□□□□□ -0.28
Cxcl1P12850 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.3□□□□□ -0.28
Cxcl1P12850 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.3□□□□□ -0.28
Cxcl1P12850 Gm7370-201ENSMUST00000219471 767 ntBASIC13.3□□□□□ -0.28
Cxcl1P12850 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.3□□□□□ -0.28
Cxcl1P12850 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cxcl1P12850 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cxcl1P12850 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.3□□□□□ -0.28
Cxcl1P12850 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.3□□□□□ -0.28
Cxcl1P12850 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl1P12850 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cxcl1P12850 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cxcl1P12850 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Gm11336-201ENSMUST00000118168 334 ntBASIC13.29□□□□□ -0.28
Cxcl1P12850 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.29□□□□□ -0.28
Cxcl1P12850 Gm10653-202ENSMUST00000139570 835 ntBASIC13.29□□□□□ -0.28
Cxcl1P12850 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cxcl1P12850 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.29□□□□□ -0.28
Cxcl1P12850 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cxcl1P12850 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cxcl1P12850 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cxcl1P12850 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Cxcl1P12850 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cxcl1P12850 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.29□□□□□ -0.28
Cxcl1P12850 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms