Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
U3KQE9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
U3KQE9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
U3KQE9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
U3KQE9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
U3KQE9 RNU6-862P-201ENST00000362804 105 ntBASIC2.65□□□□□ -1.99
U3KQE9 SNORA48.8-201ENST00000391324 134 ntBASIC2.65□□□□□ -1.99
U3KQE9 PTMAP2-201ENST00000397627 327 ntBASIC2.65□□□□□ -1.99
U3KQE9 RN7SKP200-201ENST00000410564 320 ntBASIC2.65□□□□□ -1.99
U3KQE9 AC069257.2-201ENST00000441819 155 ntBASIC2.65□□□□□ -1.99
U3KQE9 TRBV12-1-201ENST00000479785 344 ntBASIC2.65□□□□□ -1.99
U3KQE9 RN7SL504P-201ENST00000494496 287 ntBASIC2.65□□□□□ -1.99
U3KQE9 RNU1-95P-201ENST00000516357 160 ntBASIC2.65□□□□□ -1.99
U3KQE9 RNU1-128P-201ENST00000516704 160 ntBASIC2.65□□□□□ -1.99
U3KQE9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.65□□□□□ -1.99
U3KQE9 MIR7851-201ENST00000610611 160 ntBASIC2.65□□□□□ -1.99
U3KQE9 AL121772.2-201ENST00000614331 297 ntBASIC2.65□□□□□ -1.99
U3KQE9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.65□□□□□ -1.99
U3KQE9 U4.6-201ENST00000621618 127 ntBASIC2.65□□□□□ -1.99
U3KQE9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.65□□□□□ -1.99
U3KQE9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
U3KQE9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.64□□□□□ -1.99
U3KQE9 RNU6-1099P-201ENST00000363533 107 ntBASIC2.64□□□□□ -1.99
U3KQE9 RNA5SP493-201ENST00000364115 91 ntBASIC2.64□□□□□ -1.99
U3KQE9 RN7SL601P-201ENST00000471221 293 ntBASIC2.64□□□□□ -1.99
U3KQE9 MIR2276-201ENST00000516886 89 ntBASIC2.64□□□□□ -1.99
U3KQE9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.64□□□□□ -1.99
U3KQE9 AC006130.2-201ENST00000586202 326 ntBASIC2.64□□□□□ -1.99
U3KQE9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.64□□□□□ -1.99
U3KQE9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.64□□□□□ -1.99
U3KQE9 AL590808.1-201ENST00000618696 141 ntBASIC2.64□□□□□ -1.99
U3KQE9 SNORA50A-202ENST00000629536 136 ntBASIC2.64□□□□□ -1.99
U3KQE9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
U3KQE9 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.64□□□□□ -1.99
U3KQE9 AC017071.1-201ENST00000564407 2204 ntBASIC2.64□□□□□ -1.99
U3KQE9 Z83843.1-201ENST00000604070 3685 ntBASIC2.63□□□□□ -1.99
U3KQE9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.63□□□□□ -1.99
U3KQE9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.63□□□□□ -1.99
U3KQE9 RNU6-363P-201ENST00000362895 105 ntBASIC2.63□□□□□ -1.99
U3KQE9 RNU6-1134P-201ENST00000365156 101 ntBASIC2.63□□□□□ -1.99
U3KQE9 RNU6-950P-201ENST00000384651 107 ntBASIC2.63□□□□□ -1.99
U3KQE9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
U3KQE9 MIR1193-201ENST00000408109 78 ntBASIC2.63□□□□□ -1.99
U3KQE9 CYCSP19-201ENST00000411715 316 ntBASIC2.63□□□□□ -1.99
U3KQE9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.63□□□□□ -1.99
U3KQE9 PGBD4P5-201ENST00000445958 426 ntBASIC2.63□□□□□ -1.99
U3KQE9 RPL23AP67-201ENST00000465341 474 ntBASIC2.63□□□□□ -1.99
U3KQE9 AL049873.1-201ENST00000480540 376 ntBASIC2.63□□□□□ -1.99
U3KQE9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.63□□□□□ -1.99
U3KQE9 IGLV3-17-201ENST00000519099 244 ntBASIC2.63□□□□□ -1.99
U3KQE9 MIR3169-201ENST00000578032 83 ntBASIC2.63□□□□□ -1.99
U3KQE9 AC005786.1-201ENST00000588553 154 ntBASIC2.63□□□□□ -1.99
U3KQE9 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.63□□□□□ -1.99
U3KQE9 YPEL5P2-201ENST00000605553 359 ntBASIC2.63□□□□□ -1.99
U3KQE9 uc_338.25-201ENST00000613756 156 ntBASIC2.63□□□□□ -1.99
U3KQE9 MIR1245B-201ENST00000636115 69 ntBASIC2.63□□□□□ -1.99
U3KQE9 AC009093.8-201ENST00000641769 292 ntBASIC2.63□□□□□ -1.99
U3KQE9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
U3KQE9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
U3KQE9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
U3KQE9 AC092435.3-201ENST00000565538 3654 ntBASIC2.62□□□□□ -1.99
U3KQE9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
U3KQE9 FAM35CP-201ENST00000554755 2470 ntBASIC2.62□□□□□ -1.99
U3KQE9 RNU6-461P-201ENST00000364195 107 ntBASIC2.62□□□□□ -1.99
U3KQE9 Y_RNA.241-201ENST00000364470 117 ntBASIC2.62□□□□□ -1.99
U3KQE9 SNORA4.2-201ENST00000365313 147 ntBASIC2.62□□□□□ -1.99
U3KQE9 SNORA5A-201ENST00000384111 134 ntBASIC2.62□□□□□ -1.99
U3KQE9 RNU6-163P-201ENST00000384396 106 ntBASIC2.62□□□□□ -1.99
U3KQE9 Y_RNA.531-201ENST00000384589 121 ntBASIC2.62□□□□□ -1.99
U3KQE9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
U3KQE9 MIR1262-201ENST00000408276 93 ntBASIC2.62□□□□□ -1.99
U3KQE9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.62□□□□□ -1.99
U3KQE9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
U3KQE9 AC113410.1-201ENST00000505029 247 ntBASIC2.62□□□□□ -1.99
U3KQE9 NDUFB9P3-201ENST00000521269 501 ntBASIC2.62□□□□□ -1.99
U3KQE9 AC026271.5-201ENST00000577873 130 ntBASIC2.62□□□□□ -1.99
U3KQE9 AC002984.1-201ENST00000591692 448 ntBASIC2.62□□□□□ -1.99
U3KQE9 AC087741.2-201ENST00000619415 172 ntBASIC2.62□□□□□ -1.99
U3KQE9 AC021613.1-201ENST00000623880 111 ntBASIC2.62□□□□□ -1.99
U3KQE9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.62□□□□□ -1.99
U3KQE9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
U3KQE9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
U3KQE9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
U3KQE9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.61□□□□□ -1.99
U3KQE9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
U3KQE9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.61□□□□□ -1.99
U3KQE9 RNA5SP124-201ENST00000362739 110 ntBASIC2.61□□□□□ -1.99
U3KQE9 RNU6-23P-201ENST00000363283 107 ntBASIC2.61□□□□□ -1.99
U3KQE9 SNORA70.7-201ENST00000384159 133 ntBASIC2.61□□□□□ -1.99
U3KQE9 MIR29C-201ENST00000385231 88 ntBASIC2.61□□□□□ -1.99
U3KQE9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
U3KQE9 RNU6-733P-201ENST00000410759 104 ntBASIC2.61□□□□□ -1.99
U3KQE9 AC004941.2-201ENST00000427009 228 ntBASIC2.61□□□□□ -1.99
U3KQE9 AL133547.1-201ENST00000448546 220 ntBASIC2.61□□□□□ -1.99
U3KQE9 AC114811.1-201ENST00000507207 168 ntBASIC2.61□□□□□ -1.99
U3KQE9 AC110768.1-201ENST00000509222 400 ntBASIC2.61□□□□□ -1.99
U3KQE9 AC091826.1-201ENST00000514065 313 ntBASIC2.61□□□□□ -1.99
U3KQE9 AC090821.2-201ENST00000523552 176 ntBASIC2.61□□□□□ -1.99
U3KQE9 AC004812.1-201ENST00000540773 146 ntBASIC2.61□□□□□ -1.99
U3KQE9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms