Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC090617.10-201ENST00000624308 134 ntBASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 SNORD50B-201ENST00000364995 70 ntBASIC0.15□□□□□ -2.39
USH1CQ9Y6N9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.15□□□□□ -2.39
USH1CQ9Y6N9 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
USH1CQ9Y6N9 SNORD28B-201ENST00000390993 75 ntBASIC0.15□□□□□ -2.39
USH1CQ9Y6N9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.15□□□□□ -2.39
USH1CQ9Y6N9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.15□□□□□ -2.39
USH1CQ9Y6N9 MTCO3P10-201ENST00000455912 772 ntBASIC0.15□□□□□ -2.39
USH1CQ9Y6N9 RNU6-329P-201ENST00000459618 107 ntBASIC0.15□□□□□ -2.39
USH1CQ9Y6N9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.15□□□□□ -2.39
USH1CQ9Y6N9 AL355375.2-201ENST00000574825 175 ntBASIC0.15□□□□□ -2.39
USH1CQ9Y6N9 MIR4251-201ENST00000635819 61 ntBASIC0.15□□□□□ -2.39
USH1CQ9Y6N9 AC024614.3-201ENST00000637860 256 ntBASIC0.15□□□□□ -2.39
USH1CQ9Y6N9 Y_RNA.172-201ENST00000363765 102 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 RNU6-1042P-201ENST00000384204 107 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 RNA5SP475-201ENST00000410568 110 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 RNU2-61P-201ENST00000411069 191 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 SNRPGP10-201ENST00000432323 225 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 MTND1P26-201ENST00000440488 538 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 MTND2P38-201ENST00000522536 667 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 MIR4431-201ENST00000579990 94 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 MIR548AR-201ENST00000582191 57 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 AC012433.1-201ENST00000588916 398 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 AL162730.1-201ENST00000605734 292 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 AC063944.3-201ENST00000609969 533 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 AL355073.2-201ENST00000612106 557 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 AC015726.2-201ENST00000620112 122 ntBASIC0.14□□□□□ -2.39
USH1CQ9Y6N9 MIR103A1-201ENST00000362165 78 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 MIR18A-201ENST00000362310 71 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 Y_RNA.301-201ENST00000364990 103 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 SNORD116-9-201ENST00000384000 95 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 SNORD116-3-201ENST00000384287 95 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 Y_RNA.476-201ENST00000384347 108 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 SNORD116-7-201ENST00000384404 95 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 SNORD116-5-201ENST00000384462 95 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 RNU6-831P-201ENST00000384548 107 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 UBE2V1P7-201ENST00000446395 340 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 AC011352.1-201ENST00000512300 793 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 RNU6-566P-201ENST00000516790 107 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 AC022616.4-201ENST00000522985 181 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 AP003327.1-201ENST00000529684 127 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 AC055872.1-201ENST00000570978 278 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 AC018638.8-201ENST00000588755 281 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 AC060780.3-201ENST00000589464 80 ntBASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.13□□□□□ -2.39
USH1CQ9Y6N9 MIR377-201ENST00000362145 69 ntBASIC0.12□□□□□ -2.39
USH1CQ9Y6N9 RNU6-1084P-201ENST00000362498 107 ntBASIC0.12□□□□□ -2.39
USH1CQ9Y6N9 RNU6-1301P-201ENST00000362724 104 ntBASIC0.12□□□□□ -2.39
USH1CQ9Y6N9 SNORD45.3-201ENST00000363836 72 ntBASIC0.12□□□□□ -2.39
USH1CQ9Y6N9 RNU6-879P-201ENST00000364328 108 ntBASIC0.12□□□□□ -2.39
USH1CQ9Y6N9 MLLT10P1-201ENST00000418346 262 ntBASIC0.12□□□□□ -2.39
USH1CQ9Y6N9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.12□□□□□ -2.39
USH1CQ9Y6N9 SNRPGP14-201ENST00000435400 219 ntBASIC0.12□□□□□ -2.39
USH1CQ9Y6N9 HMGN2P32-201ENST00000444648 269 ntBASIC0.12□□□□□ -2.39
USH1CQ9Y6N9 AC026782.1-201ENST00000512952 449 ntBASIC0.12□□□□□ -2.39
USH1CQ9Y6N9 RNU6-1012P-201ENST00000516606 109 ntBASIC0.12□□□□□ -2.39
USH1CQ9Y6N9 MIR2115-201ENST00000516657 100 ntBASIC0.12□□□□□ -2.39
USH1CQ9Y6N9 RNU6-1314P-201ENST00000517139 104 ntBASIC0.12□□□□□ -2.39
USH1CQ9Y6N9 AC092634.7-201ENST00000621022 103 ntBASIC0.12□□□□□ -2.39
USH1CQ9Y6N9 Y_RNA.30-201ENST00000362572 97 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 RNA5SP257-201ENST00000363023 116 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 SNORD44.1-201ENST00000363202 61 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 snoU2-30.1-201ENST00000365012 70 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 RNU4-45P-201ENST00000365469 141 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 Y_RNA.368-201ENST00000365547 113 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 Y_RNA.370-201ENST00000365589 108 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 RNU6-1310P-201ENST00000384153 107 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 MIR520H-201ENST00000385126 88 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 MT-TN-201ENST00000387400 73 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 AL031003.1-201ENST00000404229 172 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 MTCO2P27-201ENST00000420740 428 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 snoU13.21-201ENST00000459368 105 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 RNU6-830P-201ENST00000516353 107 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 RNU1-54P-201ENST00000517181 120 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 RBM11P1-201ENST00000604951 799 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 AC018462.2-201ENST00000605375 395 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 AC078938.1-201ENST00000620993 318 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 MIR3662-201ENST00000637030 95 ntBASIC0.11□□□□□ -2.39
USH1CQ9Y6N9 Y_RNA.148-201ENST00000363557 117 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 RNU6-961P-201ENST00000363893 105 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 RNU6-1090P-201ENST00000364065 94 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 Y_RNA.251-201ENST00000364551 99 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 SNORD12B-201ENST00000410433 91 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 RNU2-16P-201ENST00000410712 136 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 RNU6-373P-201ENST00000411247 98 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 MTND1P1-201ENST00000445453 368 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 NDUFA4P2-201ENST00000489989 244 ntBASIC0.1□□□□□ -2.39
USH1CQ9Y6N9 MTND3P12-201ENST00000559068 328 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms