Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 AP005660.1-201ENST00000522972 293 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 AC027419.1-201ENST00000522976 328 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 AC004832.4-201ENST00000608952 331 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 ZNF355P-201ENST00000427301 3216 ntBASIC2.4□□□□□ -2.02
NR2E3Q9Y5X4 RNU4-10P-201ENST00000364383 140 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 Y_RNA.240-201ENST00000364469 95 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 RNU6-417P-201ENST00000384712 107 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 Y_RNA.572-201ENST00000384757 98 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 MIR524-201ENST00000385242 87 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 RNU11-3P-201ENST00000391111 133 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 SNORA17.3-201ENST00000391159 129 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 AL117342.1-201ENST00000404861 406 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 AL355497.1-201ENST00000406262 551 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 CST2P1-201ENST00000425770 87 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 AC018634.1-201ENST00000437554 401 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 RNU7-193P-201ENST00000516723 65 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 MIR4438-201ENST00000585271 93 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 U6.73-201ENST00000619194 103 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 U6.106-201ENST00000636360 105 ntBASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NR2E3Q9Y5X4 snoU2_19.4-201ENST00000364329 80 ntBASIC2.39□□□□□ -2.03
NR2E3Q9Y5X4 SNORA40.18-201ENST00000391200 128 ntBASIC2.39□□□□□ -2.03
NR2E3Q9Y5X4 MTCO2P33-201ENST00000402100 465 ntBASIC2.39□□□□□ -2.03
NR2E3Q9Y5X4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.39□□□□□ -2.03
NR2E3Q9Y5X4 MTND2P29-201ENST00000438595 412 ntBASIC2.39□□□□□ -2.03
NR2E3Q9Y5X4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.39□□□□□ -2.03
NR2E3Q9Y5X4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.39□□□□□ -2.03
NR2E3Q9Y5X4 MIR4529-201ENST00000578110 78 ntBASIC2.39□□□□□ -2.03
NR2E3Q9Y5X4 AC007229.1-201ENST00000590455 412 ntBASIC2.39□□□□□ -2.03
NR2E3Q9Y5X4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NR2E3Q9Y5X4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.38□□□□□ -2.03
NR2E3Q9Y5X4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.38□□□□□ -2.03
NR2E3Q9Y5X4 RNU1-96P-201ENST00000364163 162 ntBASIC2.38□□□□□ -2.03
NR2E3Q9Y5X4 Y_RNA.224-201ENST00000364308 111 ntBASIC2.38□□□□□ -2.03
NR2E3Q9Y5X4 U8.7-201ENST00000364940 136 ntBASIC2.38□□□□□ -2.03
NR2E3Q9Y5X4 RNU6-381P-201ENST00000391259 108 ntBASIC2.38□□□□□ -2.03
NR2E3Q9Y5X4 AC097462.1-201ENST00000514125 324 ntBASIC2.38□□□□□ -2.03
NR2E3Q9Y5X4 RNU6-63P-201ENST00000516690 95 ntBASIC2.38□□□□□ -2.03
NR2E3Q9Y5X4 MRPS18CP4-201ENST00000535821 231 ntBASIC2.38□□□□□ -2.03
NR2E3Q9Y5X4 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.38□□□□□ -2.03
NR2E3Q9Y5X4 MIR6766-201ENST00000622641 72 ntBASIC2.38□□□□□ -2.03
NR2E3Q9Y5X4 AC022513.1-201ENST00000624512 117 ntBASIC2.38□□□□□ -2.03
NR2E3Q9Y5X4 RNU6-862P-201ENST00000362804 105 ntBASIC2.37□□□□□ -2.03
NR2E3Q9Y5X4 RNU1-22P-201ENST00000363334 158 ntBASIC2.37□□□□□ -2.03
NR2E3Q9Y5X4 Y_RNA.571-201ENST00000384753 98 ntBASIC2.37□□□□□ -2.03
NR2E3Q9Y5X4 MIR597-201ENST00000384968 97 ntBASIC2.37□□□□□ -2.03
NR2E3Q9Y5X4 MIR626-201ENST00000385032 94 ntBASIC2.37□□□□□ -2.03
NR2E3Q9Y5X4 RNU5E-9P-201ENST00000411164 104 ntBASIC2.37□□□□□ -2.03
NR2E3Q9Y5X4 RNU6-1278P-201ENST00000516130 107 ntBASIC2.37□□□□□ -2.03
NR2E3Q9Y5X4 AC024995.1-201ENST00000523014 93 ntBASIC2.37□□□□□ -2.03
NR2E3Q9Y5X4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.37□□□□□ -2.03
NR2E3Q9Y5X4 AL359075.3-201ENST00000613288 217 ntBASIC2.37□□□□□ -2.03
NR2E3Q9Y5X4 MIR203B-201ENST00000636080 86 ntBASIC2.37□□□□□ -2.03
NR2E3Q9Y5X4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
NR2E3Q9Y5X4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 RNU6-899P-201ENST00000363947 107 ntBASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 RNU11-5P-201ENST00000391216 129 ntBASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 AC099677.2-201ENST00000436385 175 ntBASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 AC010409.1-201ENST00000487382 476 ntBASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 SCARNA8-201ENST00000515924 131 ntBASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 RNU7-99P-201ENST00000516271 62 ntBASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 RNU7-115P-201ENST00000516433 55 ntBASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 RNU7-172P-201ENST00000517125 64 ntBASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 AC078899.2-201ENST00000595282 212 ntBASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.36□□□□□ -2.03
NR2E3Q9Y5X4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NR2E3Q9Y5X4 RNU4-17P-201ENST00000365598 141 ntBASIC2.35□□□□□ -2.03
NR2E3Q9Y5X4 RNA5SP467-201ENST00000391274 118 ntBASIC2.35□□□□□ -2.03
NR2E3Q9Y5X4 RNU6-394P-201ENST00000410735 107 ntBASIC2.35□□□□□ -2.03
NR2E3Q9Y5X4 RNU6-1135P-201ENST00000411083 103 ntBASIC2.35□□□□□ -2.03
NR2E3Q9Y5X4 EBAG9P1-201ENST00000418955 543 ntBASIC2.35□□□□□ -2.03
NR2E3Q9Y5X4 HMGN2P38-201ENST00000423806 265 ntBASIC2.35□□□□□ -2.03
NR2E3Q9Y5X4 AC117454.1-201ENST00000491120 168 ntBASIC2.35□□□□□ -2.03
NR2E3Q9Y5X4 RNU1-142P-201ENST00000516682 145 ntBASIC2.35□□□□□ -2.03
NR2E3Q9Y5X4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.35□□□□□ -2.03
NR2E3Q9Y5X4 AC015720.1-201ENST00000565251 277 ntBASIC2.35□□□□□ -2.03
NR2E3Q9Y5X4 AP003357.1-201ENST00000604497 148 ntBASIC2.35□□□□□ -2.03
NR2E3Q9Y5X4 Y_RNA.7-201ENST00000362352 102 ntBASIC2.34□□□□□ -2.03
NR2E3Q9Y5X4 RNU6-457P-201ENST00000363999 107 ntBASIC2.34□□□□□ -2.03
NR2E3Q9Y5X4 Y_RNA.412-201ENST00000384001 104 ntBASIC2.34□□□□□ -2.03
NR2E3Q9Y5X4 RNU6-1323P-201ENST00000384025 107 ntBASIC2.34□□□□□ -2.03
NR2E3Q9Y5X4 Y_RNA.441-201ENST00000384123 112 ntBASIC2.34□□□□□ -2.03
NR2E3Q9Y5X4 MIR526A2-201ENST00000390198 65 ntBASIC2.34□□□□□ -2.03
NR2E3Q9Y5X4 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
NR2E3Q9Y5X4 RNU2-2P-201ENST00000410396 191 ntBASIC2.34□□□□□ -2.03
NR2E3Q9Y5X4 RNU6-1186P-201ENST00000410429 97 ntBASIC2.34□□□□□ -2.03
NR2E3Q9Y5X4 RNA5SP511-201ENST00000410487 115 ntBASIC2.34□□□□□ -2.03
NR2E3Q9Y5X4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.34□□□□□ -2.03
NR2E3Q9Y5X4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.34□□□□□ -2.03
NR2E3Q9Y5X4 Y_RNA.662-201ENST00000516028 97 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms