Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 RNU1-97P-201ENST00000516872 164 ntBASIC1.78□□□□□ -2.12
CLDN16Q9Y5I7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.78□□□□□ -2.12
CLDN16Q9Y5I7 AL162424.1-201ENST00000602325 221 ntBASIC1.78□□□□□ -2.12
CLDN16Q9Y5I7 AP003357.1-201ENST00000604497 148 ntBASIC1.78□□□□□ -2.12
CLDN16Q9Y5I7 AC100821.1-201ENST00000523153 2479 ntBASIC1.78□□□□□ -2.12
CLDN16Q9Y5I7 UBE2WP1-201ENST00000362030 340 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 RNU6-1205P-201ENST00000363625 106 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.217-201ENST00000364214 105 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.293-201ENST00000364908 93 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.401-201ENST00000383965 117 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.518-201ENST00000384552 113 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 MIR9-3-201ENST00000385084 90 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 MIR30A-201ENST00000385092 71 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 AL034345.1-201ENST00000407768 123 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 SNORA36B-201ENST00000410438 131 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 FTH1P12-201ENST00000432137 551 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 AC003989.2-201ENST00000440224 169 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.641-201ENST00000459414 105 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.637-201ENST00000459424 114 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 RPS29P11-201ENST00000496507 171 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 SNORA31.10-201ENST00000516482 106 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 AC022254.1-201ENST00000567857 235 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 AC012493.3-201ENST00000604494 112 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 SNORA28-201ENST00000606769 126 ntBASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.77□□□□□ -2.13
CLDN16Q9Y5I7 RNU6-439P-201ENST00000384188 106 ntBASIC1.76□□□□□ -2.13
CLDN16Q9Y5I7 MIR934-201ENST00000401241 83 ntBASIC1.76□□□□□ -2.13
CLDN16Q9Y5I7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.76□□□□□ -2.13
CLDN16Q9Y5I7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.76□□□□□ -2.13
CLDN16Q9Y5I7 AL358944.1-201ENST00000528537 144 ntBASIC1.76□□□□□ -2.13
CLDN16Q9Y5I7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.76□□□□□ -2.13
CLDN16Q9Y5I7 AC127455.1-201ENST00000565496 145 ntBASIC1.76□□□□□ -2.13
CLDN16Q9Y5I7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.76□□□□□ -2.13
CLDN16Q9Y5I7 AL078604.3-201ENST00000615580 211 ntBASIC1.76□□□□□ -2.13
CLDN16Q9Y5I7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 SNORD68-201ENST00000363214 84 ntBASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.307-201ENST00000365022 117 ntBASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.416-201ENST00000384014 113 ntBASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 RNU6-211P-201ENST00000384047 107 ntBASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 MLLT10P1-201ENST00000418346 262 ntBASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.673-201ENST00000516306 88 ntBASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 RNU7-28P-201ENST00000516759 62 ntBASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 MIR5692C2-201ENST00000577959 77 ntBASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 MIR3128-201ENST00000581957 66 ntBASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 BX284668.6-201ENST00000606899 438 ntBASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 MIR6845-201ENST00000613182 61 ntBASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 AC013791.1-201ENST00000616619 62 ntBASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
CLDN16Q9Y5I7 SNORA20.1-201ENST00000364790 130 ntBASIC1.74□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.447-201ENST00000384184 113 ntBASIC1.74□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.562-201ENST00000384695 113 ntBASIC1.74□□□□□ -2.13
CLDN16Q9Y5I7 RNU6-1031P-201ENST00000384773 107 ntBASIC1.74□□□□□ -2.13
CLDN16Q9Y5I7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CLDN16Q9Y5I7 RNA5SP482-201ENST00000391269 118 ntBASIC1.74□□□□□ -2.13
CLDN16Q9Y5I7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.74□□□□□ -2.13
CLDN16Q9Y5I7 AC005357.1-201ENST00000588399 301 ntBASIC1.74□□□□□ -2.13
CLDN16Q9Y5I7 AL008718.3-201ENST00000610217 321 ntBASIC1.74□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.65-201ENST00000362846 100 ntBASIC1.73□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.203-201ENST00000364106 102 ntBASIC1.73□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.478-201ENST00000384358 107 ntBASIC1.73□□□□□ -2.13
CLDN16Q9Y5I7 MIR1267-201ENST00000408723 78 ntBASIC1.73□□□□□ -2.13
CLDN16Q9Y5I7 Y_RNA.618-201ENST00000410949 107 ntBASIC1.73□□□□□ -2.13
CLDN16Q9Y5I7 RNU6-651P-201ENST00000411040 105 ntBASIC1.73□□□□□ -2.13
CLDN16Q9Y5I7 RNU6-437P-201ENST00000459408 95 ntBASIC1.73□□□□□ -2.13
CLDN16Q9Y5I7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.73□□□□□ -2.13
CLDN16Q9Y5I7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.73□□□□□ -2.13
CLDN16Q9Y5I7 AC107393.1-201ENST00000512403 346 ntBASIC1.73□□□□□ -2.13
CLDN16Q9Y5I7 AC103810.8-201ENST00000607347 118 ntBASIC1.73□□□□□ -2.13
CLDN16Q9Y5I7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
CLDN16Q9Y5I7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CLDN16Q9Y5I7 MIR126-201ENST00000362291 85 ntBASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 RNU6-661P-201ENST00000362409 107 ntBASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 RNU4-41P-201ENST00000364426 143 ntBASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 RNU6-144P-201ENST00000383951 107 ntBASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 AC019129.1-201ENST00000403786 261 ntBASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 CYCSP49-201ENST00000420810 319 ntBASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 MIR3935-201ENST00000583472 104 ntBASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 AC006006.1-201ENST00000603082 144 ntBASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 AP000942.4-201ENST00000604811 241 ntBASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 JPX_2.1-201ENST00000614161 69 ntBASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 MIR8074-201ENST00000615081 81 ntBASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 ICE2P2-201ENST00000483823 2787 ntBASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CLDN16Q9Y5I7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
CLDN16Q9Y5I7 MIR367-201ENST00000362299 68 ntBASIC1.71□□□□□ -2.14
CLDN16Q9Y5I7 Y_RNA.60-201ENST00000362831 98 ntBASIC1.71□□□□□ -2.14
CLDN16Q9Y5I7 Y_RNA.122-201ENST00000363331 96 ntBASIC1.71□□□□□ -2.14
CLDN16Q9Y5I7 Y_RNA.188-201ENST00000363952 111 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms