Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC078938.1-201ENST00000620993 318 ntBASIC2.24□□□□□ -2.05
PCDHGA9Q9Y5G4 MIR1291-201ENST00000627649 87 ntBASIC2.24□□□□□ -2.05
PCDHGA9Q9Y5G4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PCDHGA9Q9Y5G4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHGA9Q9Y5G4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHGA9Q9Y5G4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHGA9Q9Y5G4 Y_RNA.265-201ENST00000364677 108 ntBASIC2.23□□□□□ -2.05
PCDHGA9Q9Y5G4 RNU6-1318P-201ENST00000365389 103 ntBASIC2.23□□□□□ -2.05
PCDHGA9Q9Y5G4 Y_RNA.626-201ENST00000411288 95 ntBASIC2.23□□□□□ -2.05
PCDHGA9Q9Y5G4 RPL30P13-201ENST00000418873 348 ntBASIC2.23□□□□□ -2.05
PCDHGA9Q9Y5G4 AC244636.1-201ENST00000421152 228 ntBASIC2.23□□□□□ -2.05
PCDHGA9Q9Y5G4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.23□□□□□ -2.05
PCDHGA9Q9Y5G4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHGA9Q9Y5G4 SNORD116-28-201ENST00000516123 91 ntBASIC2.23□□□□□ -2.05
PCDHGA9Q9Y5G4 JPX_2.1-201ENST00000614161 69 ntBASIC2.23□□□□□ -2.05
PCDHGA9Q9Y5G4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PCDHGA9Q9Y5G4 SNORA1B-201ENST00000362535 133 ntBASIC2.22□□□□□ -2.05
PCDHGA9Q9Y5G4 RNA5SP276-201ENST00000362580 94 ntBASIC2.22□□□□□ -2.05
PCDHGA9Q9Y5G4 RNU6-200P-201ENST00000364743 107 ntBASIC2.22□□□□□ -2.05
PCDHGA9Q9Y5G4 MIR626-201ENST00000385032 94 ntBASIC2.22□□□□□ -2.05
PCDHGA9Q9Y5G4 AL138752.1-201ENST00000452964 351 ntBASIC2.22□□□□□ -2.05
PCDHGA9Q9Y5G4 snoU13.27-201ENST00000459278 104 ntBASIC2.22□□□□□ -2.05
PCDHGA9Q9Y5G4 HMGN1P7-201ENST00000491722 313 ntBASIC2.22□□□□□ -2.05
PCDHGA9Q9Y5G4 RPL23AP63-201ENST00000498752 471 ntBASIC2.22□□□□□ -2.05
PCDHGA9Q9Y5G4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PCDHGA9Q9Y5G4 AC092881.1-201ENST00000638218 2733 ntBASIC2.22□□□□□ -2.05
PCDHGA9Q9Y5G4 RNU4-41P-201ENST00000364426 143 ntBASIC2.21□□□□□ -2.06
PCDHGA9Q9Y5G4 SNORA16B-201ENST00000364674 135 ntBASIC2.21□□□□□ -2.06
PCDHGA9Q9Y5G4 MIR17-201ENST00000385012 84 ntBASIC2.21□□□□□ -2.06
PCDHGA9Q9Y5G4 HSPE1P9-201ENST00000440046 311 ntBASIC2.21□□□□□ -2.06
PCDHGA9Q9Y5G4 RNA5SP233-201ENST00000459153 113 ntBASIC2.21□□□□□ -2.06
PCDHGA9Q9Y5G4 RNA5SP281-201ENST00000516504 135 ntBASIC2.21□□□□□ -2.06
PCDHGA9Q9Y5G4 AC100767.1-201ENST00000528178 123 ntBASIC2.21□□□□□ -2.06
PCDHGA9Q9Y5G4 MIR4709-201ENST00000577272 72 ntBASIC2.21□□□□□ -2.06
PCDHGA9Q9Y5G4 AC087685.1-201ENST00000587507 141 ntBASIC2.21□□□□□ -2.06
PCDHGA9Q9Y5G4 AL929325.1-201ENST00000603096 117 ntBASIC2.21□□□□□ -2.06
PCDHGA9Q9Y5G4 AC011921.3-201ENST00000605540 361 ntBASIC2.21□□□□□ -2.06
PCDHGA9Q9Y5G4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.21□□□□□ -2.06
PCDHGA9Q9Y5G4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.21□□□□□ -2.06
PCDHGA9Q9Y5G4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
PCDHGA9Q9Y5G4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PCDHGA9Q9Y5G4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
PCDHGA9Q9Y5G4 SNORD114-1-201ENST00000362705 72 ntBASIC2.2□□□□□ -2.06
PCDHGA9Q9Y5G4 RNU6-1080P-201ENST00000383982 107 ntBASIC2.2□□□□□ -2.06
PCDHGA9Q9Y5G4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.2□□□□□ -2.06
PCDHGA9Q9Y5G4 AC046143.2-201ENST00000609789 160 ntBASIC2.2□□□□□ -2.06
PCDHGA9Q9Y5G4 AC005336.3-201ENST00000623833 2679 ntBASIC2.2□□□□□ -2.06
PCDHGA9Q9Y5G4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCDHGA9Q9Y5G4 RNU6-653P-201ENST00000363074 106 ntBASIC2.19□□□□□ -2.06
PCDHGA9Q9Y5G4 SNORD114-30-201ENST00000364448 72 ntBASIC2.19□□□□□ -2.06
PCDHGA9Q9Y5G4 RNU4-17P-201ENST00000365598 141 ntBASIC2.19□□□□□ -2.06
PCDHGA9Q9Y5G4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDHGA9Q9Y5G4 AL606517.2-201ENST00000442855 241 ntBASIC2.19□□□□□ -2.06
PCDHGA9Q9Y5G4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDHGA9Q9Y5G4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDHGA9Q9Y5G4 AC026436.1-201ENST00000510537 270 ntBASIC2.19□□□□□ -2.06
PCDHGA9Q9Y5G4 RN7SKP164-201ENST00000516138 266 ntBASIC2.19□□□□□ -2.06
PCDHGA9Q9Y5G4 RNA5SP437-201ENST00000517249 129 ntBASIC2.19□□□□□ -2.06
PCDHGA9Q9Y5G4 AC090425.1-201ENST00000610007 140 ntBASIC2.19□□□□□ -2.06
PCDHGA9Q9Y5G4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
PCDHGA9Q9Y5G4 MIR411-201ENST00000362239 96 ntBASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 RNU6-103P-201ENST00000363686 107 ntBASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 RNY3P5-201ENST00000384127 102 ntBASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 RNU6-482P-201ENST00000391068 107 ntBASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 RPS27P21-201ENST00000486977 252 ntBASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 RNU6-126P-201ENST00000516685 103 ntBASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 SNORA31.17-201ENST00000516953 127 ntBASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 AC015712.3-201ENST00000559380 164 ntBASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 AC130289.1-201ENST00000577321 73 ntBASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 MIR4713-201ENST00000582691 75 ntBASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 MIR5007-201ENST00000583098 95 ntBASIC2.18□□□□□ -2.06
PCDHGA9Q9Y5G4 MIR126-201ENST00000362291 85 ntBASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 Y_RNA.253-201ENST00000364562 112 ntBASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 RNU6-969P-201ENST00000383900 105 ntBASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 Y_RNA.785-201ENST00000384290 109 ntBASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 RNU6-1031P-201ENST00000384773 107 ntBASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 SNRPGP10-201ENST00000432323 225 ntBASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 AL591806.2-201ENST00000433122 173 ntBASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 AC079804.2-201ENST00000490376 200 ntBASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 AC108210.2-201ENST00000503681 201 ntBASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 SNORA31.10-201ENST00000516482 106 ntBASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 MIR3668-201ENST00000582138 75 ntBASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 MIR6873-201ENST00000622788 63 ntBASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHGA9Q9Y5G4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PCDHGA9Q9Y5G4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.16□□□□□ -2.06
PCDHGA9Q9Y5G4 MIR21-201ENST00000362134 72 ntBASIC2.16□□□□□ -2.06
PCDHGA9Q9Y5G4 RNU6-661P-201ENST00000362409 107 ntBASIC2.16□□□□□ -2.06
PCDHGA9Q9Y5G4 Y_RNA.24-201ENST00000362508 103 ntBASIC2.16□□□□□ -2.06
PCDHGA9Q9Y5G4 Y_RNA.121-201ENST00000363309 113 ntBASIC2.16□□□□□ -2.06
PCDHGA9Q9Y5G4 RNU6-1209P-201ENST00000363655 107 ntBASIC2.16□□□□□ -2.06
PCDHGA9Q9Y5G4 RNU6-1020P-201ENST00000363684 107 ntBASIC2.16□□□□□ -2.06
PCDHGA9Q9Y5G4 RNU6-414P-201ENST00000363705 104 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 357.2 ms