Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RNU6-876P-201ENST00000391295 104 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 RNU6-710P-201ENST00000410424 105 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 MCFD2P1-201ENST00000417812 300 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 AC099799.1-201ENST00000439809 192 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 MTCO3P10-201ENST00000455912 772 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 Y_RNA.653-201ENST00000459091 95 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 AC098869.1-201ENST00000481627 292 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 COX6CP6-201ENST00000490840 228 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 RN7SKP295-201ENST00000517264 153 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 AC025627.3-201ENST00000582078 182 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 AC113139.1-201ENST00000605049 239 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 U6atac.1-201ENST00000616025 117 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 AC139792.2-201ENST00000624218 587 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 Y_RNA.248-201ENST00000364501 109 ntBASIC0.57□□□□□ -2.32
KCNIP3Q9Y2W7 Y_RNA.329-201ENST00000365209 107 ntBASIC0.57□□□□□ -2.32
KCNIP3Q9Y2W7 MIR559-201ENST00000385188 96 ntBASIC0.57□□□□□ -2.32
KCNIP3Q9Y2W7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.57□□□□□ -2.32
KCNIP3Q9Y2W7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.57□□□□□ -2.32
KCNIP3Q9Y2W7 AL392103.1-201ENST00000447000 198 ntBASIC0.57□□□□□ -2.32
KCNIP3Q9Y2W7 RNU6-1110P-201ENST00000516462 101 ntBASIC0.57□□□□□ -2.32
KCNIP3Q9Y2W7 AC036111.3-201ENST00000526389 112 ntBASIC0.57□□□□□ -2.32
KCNIP3Q9Y2W7 AC025253.1-201ENST00000613623 543 ntBASIC0.57□□□□□ -2.32
KCNIP3Q9Y2W7 AC133104.2-201ENST00000615272 193 ntBASIC0.57□□□□□ -2.32
KCNIP3Q9Y2W7 AL353997.5-201ENST00000618886 171 ntBASIC0.57□□□□□ -2.32
KCNIP3Q9Y2W7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.57□□□□□ -2.32
KCNIP3Q9Y2W7 AC134026.1-201ENST00000623249 2239 ntBASIC0.56□□□□□ -2.32
KCNIP3Q9Y2W7 RNU6-490P-201ENST00000362985 107 ntBASIC0.56□□□□□ -2.32
KCNIP3Q9Y2W7 Y_RNA.310-201ENST00000365063 113 ntBASIC0.56□□□□□ -2.32
KCNIP3Q9Y2W7 Y_RNA.314-201ENST00000365114 102 ntBASIC0.56□□□□□ -2.32
KCNIP3Q9Y2W7 RNU6-1175P-201ENST00000365200 107 ntBASIC0.56□□□□□ -2.32
KCNIP3Q9Y2W7 MIR1302-7-201ENST00000408841 72 ntBASIC0.56□□□□□ -2.32
KCNIP3Q9Y2W7 RNU6-855P-201ENST00000410395 104 ntBASIC0.56□□□□□ -2.32
KCNIP3Q9Y2W7 RNU6-1304P-201ENST00000411374 106 ntBASIC0.56□□□□□ -2.32
KCNIP3Q9Y2W7 AC005042.3-201ENST00000453230 174 ntBASIC0.56□□□□□ -2.32
KCNIP3Q9Y2W7 RNU6-559P-201ENST00000516151 98 ntBASIC0.56□□□□□ -2.32
KCNIP3Q9Y2W7 RNU7-116P-201ENST00000516940 62 ntBASIC0.56□□□□□ -2.32
KCNIP3Q9Y2W7 MIR4423-201ENST00000580922 80 ntBASIC0.56□□□□□ -2.32
KCNIP3Q9Y2W7 AC092794.1-201ENST00000612734 582 ntBASIC0.56□□□□□ -2.32
KCNIP3Q9Y2W7 AC008133.2-201ENST00000624540 351 ntBASIC0.56□□□□□ -2.32
KCNIP3Q9Y2W7 Y_RNA.368-201ENST00000365547 113 ntBASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 RNU6-708P-201ENST00000384217 107 ntBASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 SNORD89-201ENST00000390981 114 ntBASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 SNORD111-201ENST00000408139 94 ntBASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 SNORD99-201ENST00000408612 74 ntBASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 MIR1261-201ENST00000408659 82 ntBASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 AC087685.1-201ENST00000587507 141 ntBASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 AL590095.2-201ENST00000604136 117 ntBASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 RNU6-94P-201ENST00000607728 107 ntBASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 AC007742.2-201ENST00000618226 398 ntBASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 MIR4251-201ENST00000635819 61 ntBASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 AC023934.1-201ENST00000574529 2389 ntBASIC0.55□□□□□ -2.32
KCNIP3Q9Y2W7 SNORD14E-201ENST00000364009 85 ntBASIC0.54□□□□□ -2.32
KCNIP3Q9Y2W7 Y_RNA.456-201ENST00000384232 111 ntBASIC0.54□□□□□ -2.32
KCNIP3Q9Y2W7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.54□□□□□ -2.32
KCNIP3Q9Y2W7 AC004941.2-201ENST00000427009 228 ntBASIC0.54□□□□□ -2.32
KCNIP3Q9Y2W7 AC117454.1-201ENST00000491120 168 ntBASIC0.54□□□□□ -2.32
KCNIP3Q9Y2W7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.54□□□□□ -2.32
KCNIP3Q9Y2W7 VN1R91P-201ENST00000594377 169 ntBASIC0.54□□□□□ -2.32
KCNIP3Q9Y2W7 AP000942.3-201ENST00000603702 160 ntBASIC0.54□□□□□ -2.32
KCNIP3Q9Y2W7 AP003357.1-201ENST00000604497 148 ntBASIC0.54□□□□□ -2.32
KCNIP3Q9Y2W7 7SK.10-201ENST00000621414 298 ntBASIC0.54□□□□□ -2.32
KCNIP3Q9Y2W7 MIR6835-201ENST00000621552 64 ntBASIC0.54□□□□□ -2.32
KCNIP3Q9Y2W7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 SNORD113.3-201ENST00000364630 78 ntBASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 Y_RNA.341-201ENST00000365341 102 ntBASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 Y_RNA.370-201ENST00000365589 108 ntBASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 AC067940.1-201ENST00000458411 300 ntBASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 AC091951.2-201ENST00000500762 203 ntBASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 AC108210.2-201ENST00000503681 201 ntBASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 RNU6-113P-201ENST00000516653 101 ntBASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 POLR3GP1-201ENST00000594073 261 ntBASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 AC108706.1-201ENST00000611053 297 ntBASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 AL136317.1-201ENST00000612653 226 ntBASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 AC010205.1-201ENST00000616668 449 ntBASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
KCNIP3Q9Y2W7 Y_RNA.203-201ENST00000364106 102 ntBASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 RNU6-654P-201ENST00000364373 107 ntBASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.327-201ENST00000365201 102 ntBASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 SNORD38C-201ENST00000384381 69 ntBASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 SNORD28B-201ENST00000390993 75 ntBASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 RNU6-613P-201ENST00000410412 108 ntBASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 AC096644.2-201ENST00000429278 159 ntBASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 SNRPGP14-201ENST00000435400 219 ntBASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 RNU6-830P-201ENST00000516353 107 ntBASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 RNU6-699P-201ENST00000517081 110 ntBASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 AC006600.1-201ENST00000572529 153 ntBASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 MIR3973-201ENST00000579824 107 ntBASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 MIR548AR-201ENST00000582191 57 ntBASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 MIR6516-201ENST00000630554 81 ntBASIC0.52□□□□□ -2.33
KCNIP3Q9Y2W7 Y_RNA.148-201ENST00000363557 117 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 RNU6-53P-201ENST00000365367 106 ntBASIC0.51□□□□□ -2.33
KCNIP3Q9Y2W7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms