Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL357312.1-201ENST00000603879 298 ntBASIC0.84□□□□□ -2.27
TRAPPC4Q9Y296 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.84□□□□□ -2.27
TRAPPC4Q9Y296 AL591926.4-201ENST00000616895 298 ntBASIC0.84□□□□□ -2.27
TRAPPC4Q9Y296 AC012676.2-201ENST00000619258 186 ntBASIC0.84□□□□□ -2.27
TRAPPC4Q9Y296 AL606534.2-204ENST00000635008 178 ntBASIC0.84□□□□□ -2.27
TRAPPC4Q9Y296 Y_RNA.39-201ENST00000362620 98 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 RNU1-124P-201ENST00000363861 145 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.315-201ENST00000365117 102 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.329-201ENST00000365209 107 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 AL390729.2-201ENST00000416137 156 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 AC104332.1-201ENST00000440471 797 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 RPS20P10-201ENST00000451209 253 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 AC048334.1-201ENST00000477975 159 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 UBL5P1-201ENST00000507979 193 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 MTND3P22-201ENST00000510932 243 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 SNORA31.4-201ENST00000516049 129 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 AC005972.2-201ENST00000604690 348 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 AL121655.1-201ENST00000605811 308 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 BX284668.6-201ENST00000606899 438 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 SNORD58B-201ENST00000607313 66 ntBASIC0.83□□□□□ -2.28
TRAPPC4Q9Y296 AL391516.1-201ENST00000554380 2449 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 RNU4-79P-201ENST00000362764 141 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.58-201ENST00000362807 102 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 SNORD68-201ENST00000363214 84 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.154-201ENST00000363624 102 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.253-201ENST00000364562 112 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 RNY3P1-201ENST00000365085 102 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.336-201ENST00000365307 109 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 RNY3-201ENST00000365484 102 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.458-201ENST00000384240 102 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 RNU6-163P-201ENST00000384396 106 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 AL160004.2-201ENST00000432935 350 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 AC114811.1-201ENST00000507207 168 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 SNORA70.22-201ENST00000517160 124 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 LARP7P1-201ENST00000605576 316 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.772-201ENST00000606692 102 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 AL008636.1-201ENST00000625038 1018 ntBASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TRAPPC4Q9Y296 SNORD81.1-201ENST00000363064 77 ntBASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 SNORA72-201ENST00000384339 132 ntBASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 MIR19B1-201ENST00000384829 87 ntBASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 MIR452-201ENST00000385020 85 ntBASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 MIR522-201ENST00000385071 87 ntBASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 RNU6-910P-201ENST00000390844 107 ntBASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 SNORD12-201ENST00000391002 90 ntBASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 RNU6-710P-201ENST00000410424 105 ntBASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.621-201ENST00000411065 96 ntBASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 PIGPP3-201ENST00000425307 415 ntBASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 U8.19-201ENST00000459095 133 ntBASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.661-201ENST00000516003 99 ntBASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 RNU6-113P-201ENST00000516653 101 ntBASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRAPPC4Q9Y296 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 RNU4-73P-201ENST00000363164 141 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.112-201ENST00000363250 102 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.197-201ENST00000364004 102 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.310-201ENST00000365063 113 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.363-201ENST00000365529 113 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.368-201ENST00000365547 113 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 RNU6-1323P-201ENST00000384025 107 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 SNORD63-201ENST00000384262 68 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 RNY1P14-201ENST00000384426 108 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 MT-TD-201ENST00000387419 68 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 RPL39P39-201ENST00000455840 151 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 RNU6-475P-201ENST00000516073 104 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 AC136932.1-201ENST00000574771 208 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 MIR4781-201ENST00000585250 76 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 FAM106DP-201ENST00000586416 501 ntBASIC0.8□□□□□ -2.28
TRAPPC4Q9Y296 AL442644.1-201ENST00000454390 3105 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.331-201ENST00000365267 102 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 AC117470.1-201ENST00000381974 330 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.456-201ENST00000384232 111 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.526-201ENST00000384572 110 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.551-201ENST00000384661 102 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.579-201ENST00000390939 94 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 RNU6-855P-201ENST00000410395 104 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 LINC01399-202ENST00000458450 244 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 snoU13.25-201ENST00000458945 104 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 SNORD79.1-201ENST00000516069 84 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 SNORD111.1-201ENST00000516421 86 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 RNA5SP102-201ENST00000516865 106 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.713-201ENST00000517013 96 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 MIR4795-201ENST00000584182 89 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 RPS29P30-201ENST00000600975 111 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 AL096861.1-201ENST00000610899 123 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TRAPPC4Q9Y296 Y_RNA.395-201ENST00000383945 109 ntBASIC0.78□□□□□ -2.28
TRAPPC4Q9Y296 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms