Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 MIR376A2-201ENST00000636782 80 ntBASIC3.38□□□□□ -1.87
NOD1Q9Y239 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NOD1Q9Y239 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.37□□□□□ -1.87
NOD1Q9Y239 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.37□□□□□ -1.87
NOD1Q9Y239 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.37□□□□□ -1.87
NOD1Q9Y239 MIR30E-201ENST00000362104 92 ntBASIC3.37□□□□□ -1.87
NOD1Q9Y239 RNU6-442P-201ENST00000383968 104 ntBASIC3.37□□□□□ -1.87
NOD1Q9Y239 RN7SKP284-201ENST00000411002 343 ntBASIC3.37□□□□□ -1.87
NOD1Q9Y239 AL137067.1-201ENST00000615933 120 ntBASIC3.37□□□□□ -1.87
NOD1Q9Y239 AC134878.1-201ENST00000619901 243 ntBASIC3.37□□□□□ -1.87
NOD1Q9Y239 CTSLP2-204ENST00000629029 392 ntBASIC3.37□□□□□ -1.87
NOD1Q9Y239 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NOD1Q9Y239 RNU6-301P-201ENST00000384277 107 ntBASIC3.36□□□□□ -1.87
NOD1Q9Y239 RNA5SP136-201ENST00000410906 107 ntBASIC3.36□□□□□ -1.87
NOD1Q9Y239 CALM2P4-201ENST00000430810 426 ntBASIC3.36□□□□□ -1.87
NOD1Q9Y239 AL139132.1-201ENST00000431587 344 ntBASIC3.36□□□□□ -1.87
NOD1Q9Y239 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NOD1Q9Y239 MIR4762-201ENST00000585261 75 ntBASIC3.36□□□□□ -1.87
NOD1Q9Y239 AC006441.5-201ENST00000612680 209 ntBASIC3.36□□□□□ -1.87
NOD1Q9Y239 AL449363.1-201ENST00000617815 186 ntBASIC3.36□□□□□ -1.87
NOD1Q9Y239 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
NOD1Q9Y239 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NOD1Q9Y239 MIR449A-201ENST00000362113 91 ntBASIC3.35□□□□□ -1.87
NOD1Q9Y239 RNU6-23P-201ENST00000363283 107 ntBASIC3.35□□□□□ -1.87
NOD1Q9Y239 snoU2-30.1-201ENST00000365012 70 ntBASIC3.35□□□□□ -1.87
NOD1Q9Y239 Y_RNA.366-201ENST00000365540 102 ntBASIC3.35□□□□□ -1.87
NOD1Q9Y239 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NOD1Q9Y239 RNA5SP89-201ENST00000410300 108 ntBASIC3.35□□□□□ -1.87
NOD1Q9Y239 AC099677.2-201ENST00000436385 175 ntBASIC3.35□□□□□ -1.87
NOD1Q9Y239 Z96811.1-201ENST00000445880 108 ntBASIC3.35□□□□□ -1.87
NOD1Q9Y239 RNU6-168P-201ENST00000516189 101 ntBASIC3.35□□□□□ -1.87
NOD1Q9Y239 MIR3186-201ENST00000577404 85 ntBASIC3.35□□□□□ -1.87
NOD1Q9Y239 MIR3169-201ENST00000578032 83 ntBASIC3.35□□□□□ -1.87
NOD1Q9Y239 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.34□□□□□ -1.87
NOD1Q9Y239 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.34□□□□□ -1.87
NOD1Q9Y239 U8.5-201ENST00000364528 136 ntBASIC3.34□□□□□ -1.87
NOD1Q9Y239 RNU6-1189P-201ENST00000383958 107 ntBASIC3.34□□□□□ -1.87
NOD1Q9Y239 Y_RNA.410-201ENST00000383992 113 ntBASIC3.34□□□□□ -1.87
NOD1Q9Y239 AL135938.1-201ENST00000443141 297 ntBASIC3.34□□□□□ -1.87
NOD1Q9Y239 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.34□□□□□ -1.87
NOD1Q9Y239 RN7SL429P-201ENST00000479090 223 ntBASIC3.34□□□□□ -1.87
NOD1Q9Y239 AC021205.2-201ENST00000480069 347 ntBASIC3.34□□□□□ -1.87
NOD1Q9Y239 RN7SL297P-201ENST00000483161 293 ntBASIC3.34□□□□□ -1.87
NOD1Q9Y239 RN7SL489P-201ENST00000486185 223 ntBASIC3.34□□□□□ -1.87
NOD1Q9Y239 RN7SL327P-201ENST00000488659 223 ntBASIC3.34□□□□□ -1.87
NOD1Q9Y239 RNU7-25P-201ENST00000516544 62 ntBASIC3.34□□□□□ -1.87
NOD1Q9Y239 AC107016.2-201ENST00000547968 190 ntBASIC3.34□□□□□ -1.87
NOD1Q9Y239 RN7SL853P-201ENST00000617250 223 ntBASIC3.34□□□□□ -1.87
NOD1Q9Y239 U7.8-201ENST00000619968 63 ntBASIC3.34□□□□□ -1.87
NOD1Q9Y239 ICE2P2-201ENST00000483823 2787 ntBASIC3.34□□□□□ -1.88
NOD1Q9Y239 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
NOD1Q9Y239 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NOD1Q9Y239 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
NOD1Q9Y239 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NOD1Q9Y239 RNU6-268P-201ENST00000364174 107 ntBASIC3.33□□□□□ -1.88
NOD1Q9Y239 Y_RNA.309-201ENST00000365046 111 ntBASIC3.33□□□□□ -1.88
NOD1Q9Y239 SNORA2.2-201ENST00000365473 135 ntBASIC3.33□□□□□ -1.88
NOD1Q9Y239 AC245047.3-201ENST00000429428 127 ntBASIC3.33□□□□□ -1.88
NOD1Q9Y239 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.33□□□□□ -1.88
NOD1Q9Y239 AC105272.1-201ENST00000438604 198 ntBASIC3.33□□□□□ -1.88
NOD1Q9Y239 AL109933.2-201ENST00000452651 260 ntBASIC3.33□□□□□ -1.88
NOD1Q9Y239 RNU6-412P-201ENST00000516434 106 ntBASIC3.33□□□□□ -1.88
NOD1Q9Y239 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.33□□□□□ -1.88
NOD1Q9Y239 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.33□□□□□ -1.88
NOD1Q9Y239 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.33□□□□□ -1.88
NOD1Q9Y239 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NOD1Q9Y239 SNORD115-3-201ENST00000363100 82 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 Y_RNA.116-201ENST00000363292 103 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 RNU6-1255P-201ENST00000363434 112 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 Y_RNA.265-201ENST00000364677 108 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 RNU6-851P-201ENST00000384565 107 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 RNA5SP482-201ENST00000391269 118 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 AC092427.1-202ENST00000430569 476 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 AL606517.2-201ENST00000442855 241 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 SNORD45.4-201ENST00000516629 73 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.32□□□□□ -1.88
NOD1Q9Y239 MIR4319-201ENST00000577285 85 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 AC026271.5-201ENST00000577873 130 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 uc_338.28-201ENST00000612082 187 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.32□□□□□ -1.88
NOD1Q9Y239 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.32□□□□□ -1.88
NOD1Q9Y239 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NOD1Q9Y239 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.31□□□□□ -1.88
NOD1Q9Y239 MIR450A1-201ENST00000362262 91 ntBASIC3.31□□□□□ -1.88
NOD1Q9Y239 SNORD115-28-201ENST00000363931 81 ntBASIC3.31□□□□□ -1.88
NOD1Q9Y239 Y_RNA.547-201ENST00000384654 119 ntBASIC3.31□□□□□ -1.88
NOD1Q9Y239 MIR570-201ENST00000384917 97 ntBASIC3.31□□□□□ -1.88
NOD1Q9Y239 SNORA11.4-201ENST00000408823 129 ntBASIC3.31□□□□□ -1.88
NOD1Q9Y239 RNA5SP184-201ENST00000411071 108 ntBASIC3.31□□□□□ -1.88
NOD1Q9Y239 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.31□□□□□ -1.88
NOD1Q9Y239 SNRPGP14-201ENST00000435400 219 ntBASIC3.31□□□□□ -1.88
NOD1Q9Y239 AL031737.1-201ENST00000450125 223 ntBASIC3.31□□□□□ -1.88
NOD1Q9Y239 AC010401.1-201ENST00000463867 348 ntBASIC3.31□□□□□ -1.88
NOD1Q9Y239 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.31□□□□□ -1.88
NOD1Q9Y239 RNU6-240P-201ENST00000516098 97 ntBASIC3.31□□□□□ -1.88
NOD1Q9Y239 AC004486.1-201ENST00000546846 233 ntBASIC3.31□□□□□ -1.88
NOD1Q9Y239 AC007012.1-201ENST00000567192 175 ntBASIC3.31□□□□□ -1.88
NOD1Q9Y239 MIR4425-201ENST00000580572 84 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 191.1 ms