Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC006435.5-201ENST00000624486 112 ntBASIC4.11□□□□□ -1.75
PDZRN3Q9UPQ7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDZRN3Q9UPQ7 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 SNORA5B-201ENST00000363786 132 ntBASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 RNU6-1201P-201ENST00000384227 107 ntBASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 RNU6-1197P-201ENST00000391183 107 ntBASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 RPL30P4-201ENST00000429309 333 ntBASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 MIR3124-201ENST00000582636 67 ntBASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 RPL17P51-201ENST00000605218 238 ntBASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 AC073476.4-201ENST00000628409 72 ntBASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDZRN3Q9UPQ7 MAPK10-362ENST00000641864 4484 ntBASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 AC093010.3-201ENST00000570269 15214 ntBASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 SNORA14A-201ENST00000364773 135 ntBASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 RNU6-1189P-201ENST00000383958 107 ntBASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 SNORA1.3-201ENST00000384676 136 ntBASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 Y_RNA.609-201ENST00000410669 89 ntBASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 SNORA7.5-201ENST00000410672 110 ntBASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 AL513477.1-202ENST00000417061 214 ntBASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 CST9LP2-201ENST00000437612 320 ntBASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 RPS23P4-201ENST00000487908 423 ntBASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 RNU6-1098P-201ENST00000516772 96 ntBASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 AL033523.1-201ENST00000605153 153 ntBASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 AC095038.3-201ENST00000634439 195 ntBASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.09□□□□□ -1.75
PDZRN3Q9UPQ7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 RNU6-1010P-201ENST00000362757 107 ntBASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 RNU1-22P-201ENST00000363334 158 ntBASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 RNU6-457P-201ENST00000363999 107 ntBASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 RNU6-805P-201ENST00000365643 106 ntBASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 SNORA7.4-201ENST00000384249 137 ntBASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 MIR1283-1-201ENST00000408494 87 ntBASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 RNU7-70P-201ENST00000516941 66 ntBASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 HSPE1P19-201ENST00000603327 295 ntBASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 AC002076.2-201ENST00000617362 122 ntBASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 MIR7153-201ENST00000637758 57 ntBASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDZRN3Q9UPQ7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 MIR148B-201ENST00000362252 99 ntBASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 RNU6-315P-201ENST00000362666 107 ntBASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 RNU6-301P-201ENST00000384277 107 ntBASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 RNU6-57P-201ENST00000411348 103 ntBASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 RPS27P22-201ENST00000478056 241 ntBASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 SNORD59.2-201ENST00000516873 68 ntBASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 RNU6-711P-201ENST00000517255 106 ntBASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 MIR4439-201ENST00000583746 80 ntBASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 AC006111.3-201ENST00000622137 383 ntBASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 MIR622-201ENST00000638396 96 ntBASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.07□□□□□ -1.76
PDZRN3Q9UPQ7 RNA5SP383-201ENST00000362934 120 ntBASIC4.06□□□□□ -1.76
PDZRN3Q9UPQ7 AC025750.2-201ENST00000442609 450 ntBASIC4.06□□□□□ -1.76
PDZRN3Q9UPQ7 RPL23AP63-201ENST00000498752 471 ntBASIC4.06□□□□□ -1.76
PDZRN3Q9UPQ7 AC093729.1-201ENST00000513074 128 ntBASIC4.06□□□□□ -1.76
PDZRN3Q9UPQ7 SNORA50A-202ENST00000629536 136 ntBASIC4.06□□□□□ -1.76
PDZRN3Q9UPQ7 AL137790.1-201ENST00000634283 177 ntBASIC4.06□□□□□ -1.76
PDZRN3Q9UPQ7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDZRN3Q9UPQ7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.06□□□□□ -1.76
PDZRN3Q9UPQ7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDZRN3Q9UPQ7 RNU6-975P-201ENST00000384296 105 ntBASIC4.05□□□□□ -1.76
PDZRN3Q9UPQ7 AL161651.1-201ENST00000440882 223 ntBASIC4.05□□□□□ -1.76
PDZRN3Q9UPQ7 AC016717.1-201ENST00000448918 286 ntBASIC4.05□□□□□ -1.76
PDZRN3Q9UPQ7 RPL30P14-201ENST00000482744 348 ntBASIC4.05□□□□□ -1.76
PDZRN3Q9UPQ7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC4.05□□□□□ -1.76
PDZRN3Q9UPQ7 AC140658.3-201ENST00000567603 271 ntBASIC4.05□□□□□ -1.76
PDZRN3Q9UPQ7 MIR3162-201ENST00000581818 82 ntBASIC4.05□□□□□ -1.76
PDZRN3Q9UPQ7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDZRN3Q9UPQ7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.04□□□□□ -1.76
PDZRN3Q9UPQ7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDZRN3Q9UPQ7 Y_RNA.386-201ENST00000383913 105 ntBASIC4.04□□□□□ -1.76
PDZRN3Q9UPQ7 RNU1-101P-201ENST00000391171 127 ntBASIC4.04□□□□□ -1.76
PDZRN3Q9UPQ7 RNU6-1077P-201ENST00000410506 102 ntBASIC4.04□□□□□ -1.76
PDZRN3Q9UPQ7 AL035398.1-201ENST00000430869 322 ntBASIC4.04□□□□□ -1.76
PDZRN3Q9UPQ7 HMGN1P7-201ENST00000491722 313 ntBASIC4.04□□□□□ -1.76
PDZRN3Q9UPQ7 RNU6-91P-201ENST00000607774 107 ntBASIC4.04□□□□□ -1.76
PDZRN3Q9UPQ7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.04□□□□□ -1.76
PDZRN3Q9UPQ7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.04□□□□□ -1.76
PDZRN3Q9UPQ7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.04□□□□□ -1.76
PDZRN3Q9UPQ7 AC010680.1-201ENST00000590024 3590 ntBASIC4.04□□□□□ -1.76
PDZRN3Q9UPQ7 AL365361.1-201ENST00000566942 3481 ntBASIC4.04□□□□□ -1.76
PDZRN3Q9UPQ7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDZRN3Q9UPQ7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms