Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 Y_RNA.462-201ENST00000384268 102 ntBASIC2.2□□□□□ -2.06
SHROOM4Q9ULL8 AC005534.2-201ENST00000431047 433 ntBASIC2.2□□□□□ -2.06
SHROOM4Q9ULL8 RPL39P38-201ENST00000467018 153 ntBASIC2.2□□□□□ -2.06
SHROOM4Q9ULL8 RNA5SP436-201ENST00000516020 115 ntBASIC2.2□□□□□ -2.06
SHROOM4Q9ULL8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.2□□□□□ -2.06
SHROOM4Q9ULL8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.2□□□□□ -2.06
SHROOM4Q9ULL8 MIR5188-201ENST00000583467 113 ntBASIC2.2□□□□□ -2.06
SHROOM4Q9ULL8 AL133255.1-201ENST00000606374 441 ntBASIC2.2□□□□□ -2.06
SHROOM4Q9ULL8 Y_RNA.496-201ENST00000384444 101 ntBASIC2.19□□□□□ -2.06
SHROOM4Q9ULL8 RNU6-710P-201ENST00000410424 105 ntBASIC2.19□□□□□ -2.06
SHROOM4Q9ULL8 RNU6-1199P-201ENST00000411249 104 ntBASIC2.19□□□□□ -2.06
SHROOM4Q9ULL8 RPS20P15-201ENST00000412792 311 ntBASIC2.19□□□□□ -2.06
SHROOM4Q9ULL8 AL354751.2-201ENST00000415471 210 ntBASIC2.19□□□□□ -2.06
SHROOM4Q9ULL8 AL162725.1-201ENST00000435405 301 ntBASIC2.19□□□□□ -2.06
SHROOM4Q9ULL8 U8.20-201ENST00000459445 131 ntBASIC2.19□□□□□ -2.06
SHROOM4Q9ULL8 RPL30P7-201ENST00000479312 323 ntBASIC2.19□□□□□ -2.06
SHROOM4Q9ULL8 RNU4-77P-201ENST00000516692 156 ntBASIC2.19□□□□□ -2.06
SHROOM4Q9ULL8 RN7SKP295-201ENST00000517264 153 ntBASIC2.19□□□□□ -2.06
SHROOM4Q9ULL8 AC211469.2-201ENST00000605461 205 ntBASIC2.19□□□□□ -2.06
SHROOM4Q9ULL8 AL121655.1-201ENST00000605811 308 ntBASIC2.19□□□□□ -2.06
SHROOM4Q9ULL8 RNU6-1175P-201ENST00000365200 107 ntBASIC2.18□□□□□ -2.06
SHROOM4Q9ULL8 RNU6-1105P-201ENST00000384774 107 ntBASIC2.18□□□□□ -2.06
SHROOM4Q9ULL8 AC087343.1-201ENST00000477341 475 ntBASIC2.18□□□□□ -2.06
SHROOM4Q9ULL8 AL512310.8-201ENST00000550183 120 ntBASIC2.18□□□□□ -2.06
SHROOM4Q9ULL8 MIR3664-201ENST00000579074 99 ntBASIC2.18□□□□□ -2.06
SHROOM4Q9ULL8 AL080274.1-201ENST00000605565 220 ntBASIC2.18□□□□□ -2.06
SHROOM4Q9ULL8 Y_RNA.458-201ENST00000384240 102 ntBASIC2.17□□□□□ -2.06
SHROOM4Q9ULL8 U8.16-201ENST00000391279 133 ntBASIC2.17□□□□□ -2.06
SHROOM4Q9ULL8 AC005042.3-201ENST00000453230 174 ntBASIC2.17□□□□□ -2.06
SHROOM4Q9ULL8 OR9P1P-201ENST00000496431 281 ntBASIC2.17□□□□□ -2.06
SHROOM4Q9ULL8 RNU6-199P-201ENST00000362954 107 ntBASIC2.16□□□□□ -2.06
SHROOM4Q9ULL8 RNU6-424P-201ENST00000384367 105 ntBASIC2.16□□□□□ -2.06
SHROOM4Q9ULL8 AC024067.1-201ENST00000426199 223 ntBASIC2.16□□□□□ -2.06
SHROOM4Q9ULL8 Z98949.2-201ENST00000440996 144 ntBASIC2.16□□□□□ -2.06
SHROOM4Q9ULL8 AC022616.4-201ENST00000522985 181 ntBASIC2.16□□□□□ -2.06
SHROOM4Q9ULL8 Y_RNA.80-201ENST00000362996 102 ntBASIC2.15□□□□□ -2.06
SHROOM4Q9ULL8 Y_RNA.485-201ENST00000384395 102 ntBASIC2.15□□□□□ -2.06
SHROOM4Q9ULL8 RNU2-61P-201ENST00000411069 191 ntBASIC2.15□□□□□ -2.06
SHROOM4Q9ULL8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.15□□□□□ -2.06
SHROOM4Q9ULL8 AC106754.2-201ENST00000623006 233 ntBASIC2.15□□□□□ -2.06
SHROOM4Q9ULL8 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.15□□□□□ -2.06
SHROOM4Q9ULL8 AC005592.1-201ENST00000566527 1640 ntBASIC2.15□□□□□ -2.07
SHROOM4Q9ULL8 RNA5SP457-201ENST00000363657 124 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 SNORD14.1-201ENST00000365609 90 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 Y_RNA.439-201ENST00000384119 94 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 SNORD26-201ENST00000384147 75 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 Y_RNA.621-201ENST00000411065 96 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 U8.19-201ENST00000459095 133 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 CYP3A52P-201ENST00000563326 91 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 AC005972.2-201ENST00000604690 348 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 AC011373.1-201ENST00000607270 237 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 MIR7974-201ENST00000615835 79 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 Y_RNA.424-201ENST00000384063 103 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 CALM2P4-201ENST00000430810 426 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 RNU6-322P-201ENST00000516010 103 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 RN7SKP88-201ENST00000516847 250 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 7SK.8-201ENST00000612110 250 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 7SK.11-201ENST00000615477 250 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 AC090971.5-201ENST00000621102 293 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 7SK.13-201ENST00000622040 250 ntBASIC2.14□□□□□ -2.07
SHROOM4Q9ULL8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SHROOM4Q9ULL8 RNU4-50P-201ENST00000364361 141 ntBASIC2.13□□□□□ -2.07
SHROOM4Q9ULL8 SNORA12.1-201ENST00000390873 148 ntBASIC2.13□□□□□ -2.07
SHROOM4Q9ULL8 MCFD2P1-201ENST00000417812 300 ntBASIC2.13□□□□□ -2.07
SHROOM4Q9ULL8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.13□□□□□ -2.07
SHROOM4Q9ULL8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.13□□□□□ -2.07
SHROOM4Q9ULL8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.13□□□□□ -2.07
SHROOM4Q9ULL8 MIR4778-201ENST00000577635 80 ntBASIC2.13□□□□□ -2.07
SHROOM4Q9ULL8 AL117336.2-201ENST00000602435 335 ntBASIC2.13□□□□□ -2.07
SHROOM4Q9ULL8 SNORD58B-201ENST00000607313 66 ntBASIC2.13□□□□□ -2.07
SHROOM4Q9ULL8 Y_RNA.329-201ENST00000365209 107 ntBASIC2.12□□□□□ -2.07
SHROOM4Q9ULL8 MIR653-201ENST00000385279 96 ntBASIC2.12□□□□□ -2.07
SHROOM4Q9ULL8 AC108706.1-201ENST00000611053 297 ntBASIC2.12□□□□□ -2.07
SHROOM4Q9ULL8 SNORA2.2-201ENST00000365473 135 ntBASIC2.11□□□□□ -2.07
SHROOM4Q9ULL8 Y_RNA.570-201ENST00000384750 101 ntBASIC2.11□□□□□ -2.07
SHROOM4Q9ULL8 RPEP5-201ENST00000441137 268 ntBASIC2.11□□□□□ -2.07
SHROOM4Q9ULL8 AC090049.2-201ENST00000550377 109 ntBASIC2.11□□□□□ -2.07
SHROOM4Q9ULL8 GHRLOS.1-201ENST00000610995 70 ntBASIC2.11□□□□□ -2.07
SHROOM4Q9ULL8 uc_338.22-201ENST00000622722 187 ntBASIC2.11□□□□□ -2.07
SHROOM4Q9ULL8 Y_RNA.331-201ENST00000365267 102 ntBASIC2.09□□□□□ -2.07
SHROOM4Q9ULL8 MIR891A-201ENST00000401237 79 ntBASIC2.09□□□□□ -2.07
SHROOM4Q9ULL8 MTND1P14-201ENST00000427400 950 ntBASIC2.09□□□□□ -2.07
SHROOM4Q9ULL8 RNU6-475P-201ENST00000516073 104 ntBASIC2.09□□□□□ -2.07
SHROOM4Q9ULL8 MIR26B-201ENST00000362251 77 ntBASIC2.08□□□□□ -2.08
SHROOM4Q9ULL8 Y_RNA.68-201ENST00000362881 102 ntBASIC2.08□□□□□ -2.08
SHROOM4Q9ULL8 SNORD68-201ENST00000363214 84 ntBASIC2.08□□□□□ -2.08
SHROOM4Q9ULL8 RNU6-833P-201ENST00000363486 107 ntBASIC2.08□□□□□ -2.08
SHROOM4Q9ULL8 MIR532-201ENST00000385025 91 ntBASIC2.08□□□□□ -2.08
SHROOM4Q9ULL8 MIR1302-11-201ENST00000408051 138 ntBASIC2.08□□□□□ -2.08
SHROOM4Q9ULL8 MIR1302-9-201ENST00000408365 138 ntBASIC2.08□□□□□ -2.08
SHROOM4Q9ULL8 MIR1302-10-201ENST00000408734 138 ntBASIC2.08□□□□□ -2.08
SHROOM4Q9ULL8 RNU7-110P-201ENST00000516891 62 ntBASIC2.08□□□□□ -2.08
SHROOM4Q9ULL8 CYP3A137P-201ENST00000562436 69 ntBASIC2.08□□□□□ -2.08
SHROOM4Q9ULL8 MIR1302-2-201ENST00000607096 138 ntBASIC2.08□□□□□ -2.08
SHROOM4Q9ULL8 AC027279.3-201ENST00000625055 122 ntBASIC2.08□□□□□ -2.08
SHROOM4Q9ULL8 RNU6-867P-201ENST00000364956 107 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms