Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 SNRPGP10-201ENST00000432323 225 ntBASIC3.21□□□□□ -1.9
BRPF3Q9ULD4 AC008267.6-201ENST00000441664 139 ntBASIC3.21□□□□□ -1.9
BRPF3Q9ULD4 RPS26P45-201ENST00000471748 340 ntBASIC3.21□□□□□ -1.9
BRPF3Q9ULD4 NDUFA4P2-201ENST00000489989 244 ntBASIC3.21□□□□□ -1.9
BRPF3Q9ULD4 SNORA9.3-201ENST00000516383 129 ntBASIC3.21□□□□□ -1.9
BRPF3Q9ULD4 AC024995.1-201ENST00000523014 93 ntBASIC3.21□□□□□ -1.9
BRPF3Q9ULD4 EIF4BP1-201ENST00000554881 351 ntBASIC3.21□□□□□ -1.9
BRPF3Q9ULD4 MIR3169-201ENST00000578032 83 ntBASIC3.21□□□□□ -1.9
BRPF3Q9ULD4 MIR4662B-201ENST00000579498 81 ntBASIC3.21□□□□□ -1.9
BRPF3Q9ULD4 MIR3605-201ENST00000583214 100 ntBASIC3.21□□□□□ -1.9
BRPF3Q9ULD4 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.21□□□□□ -1.9
BRPF3Q9ULD4 AP001340.1-201ENST00000624405 217 ntBASIC3.21□□□□□ -1.9
BRPF3Q9ULD4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BRPF3Q9ULD4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
BRPF3Q9ULD4 MIR26A1-201ENST00000362205 77 ntBASIC3.2□□□□□ -1.9
BRPF3Q9ULD4 SNORD115-3-201ENST00000363100 82 ntBASIC3.2□□□□□ -1.9
BRPF3Q9ULD4 RNU6-23P-201ENST00000363283 107 ntBASIC3.2□□□□□ -1.9
BRPF3Q9ULD4 AC087499.2-201ENST00000432861 149 ntBASIC3.2□□□□□ -1.9
BRPF3Q9ULD4 AL049873.1-201ENST00000480540 376 ntBASIC3.2□□□□□ -1.9
BRPF3Q9ULD4 RNU6-126P-201ENST00000516685 103 ntBASIC3.2□□□□□ -1.9
BRPF3Q9ULD4 AL358944.1-201ENST00000528537 144 ntBASIC3.2□□□□□ -1.9
BRPF3Q9ULD4 AP001328.1-201ENST00000528550 176 ntBASIC3.2□□□□□ -1.9
BRPF3Q9ULD4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.2□□□□□ -1.9
BRPF3Q9ULD4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.2□□□□□ -1.9
BRPF3Q9ULD4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRPF3Q9ULD4 Y_RNA.218-201ENST00000364218 104 ntBASIC3.19□□□□□ -1.9
BRPF3Q9ULD4 RNU1-148P-201ENST00000384472 162 ntBASIC3.19□□□□□ -1.9
BRPF3Q9ULD4 AL109933.2-201ENST00000452651 260 ntBASIC3.19□□□□□ -1.9
BRPF3Q9ULD4 RNU7-94P-201ENST00000459576 63 ntBASIC3.19□□□□□ -1.9
BRPF3Q9ULD4 AL163195.1-201ENST00000496941 348 ntBASIC3.19□□□□□ -1.9
BRPF3Q9ULD4 RNU2-56P-201ENST00000516826 190 ntBASIC3.19□□□□□ -1.9
BRPF3Q9ULD4 AC011603.4-201ENST00000611325 277 ntBASIC3.19□□□□□ -1.9
BRPF3Q9ULD4 AC022202.1-201ENST00000613515 211 ntBASIC3.19□□□□□ -1.9
BRPF3Q9ULD4 Y_RNA.71-201ENST00000362892 104 ntBASIC3.18□□□□□ -1.9
BRPF3Q9ULD4 Y_RNA.486-201ENST00000384398 107 ntBASIC3.18□□□□□ -1.9
BRPF3Q9ULD4 MIR483-201ENST00000385070 76 ntBASIC3.18□□□□□ -1.9
BRPF3Q9ULD4 MIR29C-201ENST00000385231 88 ntBASIC3.18□□□□□ -1.9
BRPF3Q9ULD4 SNORA12.1-201ENST00000390873 148 ntBASIC3.18□□□□□ -1.9
BRPF3Q9ULD4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.18□□□□□ -1.9
BRPF3Q9ULD4 RNA5SP137-201ENST00000516833 135 ntBASIC3.18□□□□□ -1.9
BRPF3Q9ULD4 AC006386.2-201ENST00000624491 75 ntBASIC3.18□□□□□ -1.9
BRPF3Q9ULD4 AC012005.1-201ENST00000624575 75 ntBASIC3.18□□□□□ -1.9
BRPF3Q9ULD4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
BRPF3Q9ULD4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
BRPF3Q9ULD4 RNU6-1290P-201ENST00000362957 109 ntBASIC3.17□□□□□ -1.9
BRPF3Q9ULD4 SNORA80A-201ENST00000363922 136 ntBASIC3.17□□□□□ -1.9
BRPF3Q9ULD4 SNORA80E-201ENST00000384744 137 ntBASIC3.17□□□□□ -1.9
BRPF3Q9ULD4 Y_RNA.584-201ENST00000391090 114 ntBASIC3.17□□□□□ -1.9
BRPF3Q9ULD4 RNA5SP21-201ENST00000410917 96 ntBASIC3.17□□□□□ -1.9
BRPF3Q9ULD4 Z92545.1-201ENST00000411782 234 ntBASIC3.17□□□□□ -1.9
BRPF3Q9ULD4 AC099677.2-201ENST00000436385 175 ntBASIC3.17□□□□□ -1.9
BRPF3Q9ULD4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.17□□□□□ -1.9
BRPF3Q9ULD4 IGLV3-17-201ENST00000519099 244 ntBASIC3.17□□□□□ -1.9
BRPF3Q9ULD4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.17□□□□□ -1.9
BRPF3Q9ULD4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
BRPF3Q9ULD4 MIR126-201ENST00000362291 85 ntBASIC3.16□□□□□ -1.9
BRPF3Q9ULD4 SNORA1B-201ENST00000362535 133 ntBASIC3.16□□□□□ -1.9
BRPF3Q9ULD4 Y_RNA.261-201ENST00000364631 102 ntBASIC3.16□□□□□ -1.9
BRPF3Q9ULD4 RNU6-915P-201ENST00000364943 103 ntBASIC3.16□□□□□ -1.9
BRPF3Q9ULD4 RNA5SP210-201ENST00000391034 120 ntBASIC3.16□□□□□ -1.9
BRPF3Q9ULD4 AC105272.1-201ENST00000438604 198 ntBASIC3.16□□□□□ -1.9
BRPF3Q9ULD4 TRBV12-1-201ENST00000479785 344 ntBASIC3.16□□□□□ -1.9
BRPF3Q9ULD4 MRPS17P9-201ENST00000511924 393 ntBASIC3.16□□□□□ -1.9
BRPF3Q9ULD4 RNU6-1234P-201ENST00000516877 103 ntBASIC3.16□□□□□ -1.9
BRPF3Q9ULD4 RNU6-365P-201ENST00000517113 106 ntBASIC3.16□□□□□ -1.9
BRPF3Q9ULD4 AP002004.2-201ENST00000531656 154 ntBASIC3.16□□□□□ -1.9
BRPF3Q9ULD4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.16□□□□□ -1.9
BRPF3Q9ULD4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
BRPF3Q9ULD4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
BRPF3Q9ULD4 Y_RNA.127-201ENST00000363386 109 ntBASIC3.15□□□□□ -1.91
BRPF3Q9ULD4 SNORD116-14-201ENST00000383894 92 ntBASIC3.15□□□□□ -1.91
BRPF3Q9ULD4 SNORD116-17-201ENST00000383929 92 ntBASIC3.15□□□□□ -1.91
BRPF3Q9ULD4 SNORD116-15-201ENST00000384445 92 ntBASIC3.15□□□□□ -1.91
BRPF3Q9ULD4 SNORD116-19-201ENST00000384729 92 ntBASIC3.15□□□□□ -1.91
BRPF3Q9ULD4 RNA5SP270-201ENST00000411361 118 ntBASIC3.15□□□□□ -1.91
BRPF3Q9ULD4 AL049830.1-201ENST00000468034 425 ntBASIC3.15□□□□□ -1.91
BRPF3Q9ULD4 RNU6-1333P-201ENST00000516162 93 ntBASIC3.15□□□□□ -1.91
BRPF3Q9ULD4 SNORD14A-201ENST00000606526 91 ntBASIC3.15□□□□□ -1.91
BRPF3Q9ULD4 U7.2-201ENST00000607576 63 ntBASIC3.15□□□□□ -1.91
BRPF3Q9ULD4 AL591926.4-201ENST00000616895 298 ntBASIC3.15□□□□□ -1.91
BRPF3Q9ULD4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
BRPF3Q9ULD4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
BRPF3Q9ULD4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
BRPF3Q9ULD4 SNORD23.1-201ENST00000408212 104 ntBASIC3.14□□□□□ -1.91
BRPF3Q9ULD4 RNU6-735P-201ENST00000410612 107 ntBASIC3.14□□□□□ -1.91
BRPF3Q9ULD4 MLLT10P1-201ENST00000418346 262 ntBASIC3.14□□□□□ -1.91
BRPF3Q9ULD4 GTF3AP2-201ENST00000557014 266 ntBASIC3.14□□□□□ -1.91
BRPF3Q9ULD4 MIR6840-201ENST00000611937 71 ntBASIC3.14□□□□□ -1.91
BRPF3Q9ULD4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
BRPF3Q9ULD4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.14□□□□□ -1.91
BRPF3Q9ULD4 AC008555.8-201ENST00000623602 2168 ntBASIC3.14□□□□□ -1.91
BRPF3Q9ULD4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
BRPF3Q9ULD4 RNU1-58P-201ENST00000362413 163 ntBASIC3.13□□□□□ -1.91
BRPF3Q9ULD4 Y_RNA.66-201ENST00000362862 102 ntBASIC3.13□□□□□ -1.91
BRPF3Q9ULD4 SNORD72-201ENST00000390994 80 ntBASIC3.13□□□□□ -1.91
BRPF3Q9ULD4 COTL1P1-201ENST00000422309 375 ntBASIC3.13□□□□□ -1.91
BRPF3Q9ULD4 Y_RNA.714-201ENST00000517065 90 ntBASIC3.13□□□□□ -1.91
BRPF3Q9ULD4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.13□□□□□ -1.91
BRPF3Q9ULD4 AC008507.4-201ENST00000585464 127 ntBASIC3.13□□□□□ -1.91
BRPF3Q9ULD4 MIR6895-201ENST00000613497 78 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms