Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 MIR6734-201ENST00000621166 68 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.60-201ENST00000362831 98 ntBASIC2.21□□□□□ -2.06
HDAC9Q9UKV0 RNU6-740P-201ENST00000364734 105 ntBASIC2.21□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.341-201ENST00000365341 102 ntBASIC2.21□□□□□ -2.06
HDAC9Q9UKV0 RNU6-662P-201ENST00000384253 104 ntBASIC2.21□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.477-201ENST00000384352 108 ntBASIC2.21□□□□□ -2.06
HDAC9Q9UKV0 RNU6-1186P-201ENST00000410429 97 ntBASIC2.21□□□□□ -2.06
HDAC9Q9UKV0 AC245047.4-201ENST00000433189 144 ntBASIC2.21□□□□□ -2.06
HDAC9Q9UKV0 RNU6-1023P-201ENST00000516137 106 ntBASIC2.21□□□□□ -2.06
HDAC9Q9UKV0 RNU6-250P-201ENST00000516958 103 ntBASIC2.21□□□□□ -2.06
HDAC9Q9UKV0 AC024995.1-201ENST00000523014 93 ntBASIC2.21□□□□□ -2.06
HDAC9Q9UKV0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.21□□□□□ -2.06
HDAC9Q9UKV0 MIR4643-201ENST00000577473 78 ntBASIC2.21□□□□□ -2.06
HDAC9Q9UKV0 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.21□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.20-201ENST00000362479 113 ntBASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 RNU6-1272P-201ENST00000362776 107 ntBASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.188-201ENST00000363952 111 ntBASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 RNA5SP138-201ENST00000365098 114 ntBASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.327-201ENST00000365201 102 ntBASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.539-201ENST00000384635 107 ntBASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 SNORA26.5-201ENST00000391215 123 ntBASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 SNORD58.1-201ENST00000391313 66 ntBASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 AC010154.1-201ENST00000425857 269 ntBASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 RNU6-1278P-201ENST00000516130 107 ntBASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 AC015720.1-201ENST00000565251 277 ntBASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 MIR5094-201ENST00000578766 85 ntBASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 AC006006.1-201ENST00000603082 144 ntBASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 AL078604.3-201ENST00000615580 211 ntBASIC2.2□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.191-201ENST00000363972 113 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.277-201ENST00000364754 102 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 SNORA72.4-201ENST00000384174 132 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.478-201ENST00000384358 107 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 RNA5SP511-201ENST00000410487 115 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 RNU6-651P-201ENST00000411040 105 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 RNU2-14P-201ENST00000411053 191 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 AL162725.1-201ENST00000435405 301 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.637-201ENST00000459424 114 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 AC079804.2-201ENST00000490376 200 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 RNA5SP220-201ENST00000516298 104 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 RNU1-142P-201ENST00000516682 145 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 RNU6-1271P-201ENST00000517049 105 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 SUB1P4-201ENST00000566062 339 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 AC073413.2-201ENST00000604332 360 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 AC069114.2-201ENST00000604699 304 ntBASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.117-201ENST00000363294 101 ntBASIC2.18□□□□□ -2.06
HDAC9Q9UKV0 RNU6-1048P-201ENST00000364054 107 ntBASIC2.18□□□□□ -2.06
HDAC9Q9UKV0 RNU6-1289P-201ENST00000384431 106 ntBASIC2.18□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.540-201ENST00000384638 111 ntBASIC2.18□□□□□ -2.06
HDAC9Q9UKV0 RNU6-763P-201ENST00000390865 106 ntBASIC2.18□□□□□ -2.06
HDAC9Q9UKV0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.18□□□□□ -2.06
HDAC9Q9UKV0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.18□□□□□ -2.06
HDAC9Q9UKV0 AC104332.1-201ENST00000440471 797 ntBASIC2.18□□□□□ -2.06
HDAC9Q9UKV0 RNU7-95P-201ENST00000459222 64 ntBASIC2.18□□□□□ -2.06
HDAC9Q9UKV0 AL163195.1-201ENST00000496941 348 ntBASIC2.18□□□□□ -2.06
HDAC9Q9UKV0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.18□□□□□ -2.06
HDAC9Q9UKV0 MIR502-201ENST00000606349 86 ntBASIC2.18□□□□□ -2.06
HDAC9Q9UKV0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
HDAC9Q9UKV0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.54-201ENST00000362766 105 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.82-201ENST00000363000 102 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.92-201ENST00000363043 102 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 SNORD27-201ENST00000363981 72 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.235-201ENST00000364412 102 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.306-201ENST00000365015 102 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.312-201ENST00000365089 102 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.322-201ENST00000365151 102 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 RNU6-376P-201ENST00000384731 106 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 RNA5SP323-201ENST00000391094 133 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 SNORD2.1-201ENST00000458762 69 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.650-201ENST00000459002 102 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 RPS29P11-201ENST00000496507 171 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.777-201ENST00000516982 102 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 AC084364.2-201ENST00000546924 395 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 MIR4282-201ENST00000583613 67 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 AC091178.2-201ENST00000584401 117 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.771-201ENST00000598668 102 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 AL162424.1-201ENST00000602325 221 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 AL008718.3-201ENST00000610217 321 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.789-201ENST00000622480 102 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 snoU18.1-201ENST00000629629 71 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.17□□□□□ -2.06
HDAC9Q9UKV0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.16□□□□□ -2.06
HDAC9Q9UKV0 AC068700.1-201ENST00000565862 3754 ntBASIC2.16□□□□□ -2.06
HDAC9Q9UKV0 RNU6-379P-201ENST00000363813 104 ntBASIC2.16□□□□□ -2.06
HDAC9Q9UKV0 AC004965.1-201ENST00000413033 213 ntBASIC2.16□□□□□ -2.06
HDAC9Q9UKV0 RPS27P1-201ENST00000450552 247 ntBASIC2.16□□□□□ -2.06
HDAC9Q9UKV0 MIR4452-201ENST00000583004 71 ntBASIC2.16□□□□□ -2.06
HDAC9Q9UKV0 AC005972.2-201ENST00000604690 348 ntBASIC2.16□□□□□ -2.06
HDAC9Q9UKV0 BX284668.6-201ENST00000606899 438 ntBASIC2.16□□□□□ -2.06
HDAC9Q9UKV0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
HDAC9Q9UKV0 AC018630.2-201ENST00000534866 2403 ntBASIC2.16□□□□□ -2.06
HDAC9Q9UKV0 Y_RNA.76-201ENST00000362931 109 ntBASIC2.15□□□□□ -2.07
HDAC9Q9UKV0 SNORA63D-201ENST00000364359 132 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms