Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.56□□□□□ -1.84
LIMD1Q9UGP4 RNU6-970P-201ENST00000516312 107 ntBASIC3.56□□□□□ -1.84
LIMD1Q9UGP4 AC069114.2-201ENST00000604699 304 ntBASIC3.56□□□□□ -1.84
LIMD1Q9UGP4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 MIR422A-201ENST00000362286 90 ntBASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 RNU6-1019P-201ENST00000364424 107 ntBASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 RNU6-938P-201ENST00000411285 103 ntBASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 RN7SL429P-201ENST00000479090 223 ntBASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 RN7SL489P-201ENST00000486185 223 ntBASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 RN7SL327P-201ENST00000488659 223 ntBASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 AC068339.1-201ENST00000526965 141 ntBASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 MIR4305-201ENST00000583252 102 ntBASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 RN7SL853P-201ENST00000617250 223 ntBASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LIMD1Q9UGP4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 AP006437.1-201ENST00000641440 3685 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 Y_RNA.78-201ENST00000362970 110 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 RNU6-640P-201ENST00000363693 105 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 U8.6-201ENST00000364939 135 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 RNU6-424P-201ENST00000384367 105 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 RNU6-163P-201ENST00000384396 106 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 RNU6-950P-201ENST00000384651 107 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 RNU6-440P-201ENST00000390882 105 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 AL035398.1-201ENST00000430869 322 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 AC006483.1-201ENST00000487308 313 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 SNORA70.19-201ENST00000516717 90 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 MIR4738-201ENST00000579134 87 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 RNVU1-4-201ENST00000612985 164 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 Y_RNA.818-201ENST00000618813 71 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 U7.8-201ENST00000619968 63 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 MIR8054-201ENST00000620877 86 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 AC091932.4-201ENST00000623386 200 ntBASIC3.54□□□□□ -1.84
LIMD1Q9UGP4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.53□□□□□ -1.84
LIMD1Q9UGP4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
LIMD1Q9UGP4 RNU1-58P-201ENST00000362413 163 ntBASIC3.53□□□□□ -1.84
LIMD1Q9UGP4 MIR548D2-201ENST00000384955 97 ntBASIC3.53□□□□□ -1.84
LIMD1Q9UGP4 RN7SKP111-201ENST00000410349 271 ntBASIC3.53□□□□□ -1.84
LIMD1Q9UGP4 RNU4-47P-201ENST00000410876 114 ntBASIC3.53□□□□□ -1.84
LIMD1Q9UGP4 AL606517.2-201ENST00000442855 241 ntBASIC3.53□□□□□ -1.84
LIMD1Q9UGP4 STAG3L5P-204ENST00000443759 179 ntBASIC3.53□□□□□ -1.84
LIMD1Q9UGP4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.53□□□□□ -1.84
LIMD1Q9UGP4 RNU6-830P-201ENST00000516353 107 ntBASIC3.53□□□□□ -1.84
LIMD1Q9UGP4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LIMD1Q9UGP4 AL596211.1-201ENST00000569873 2277 ntBASIC3.53□□□□□ -1.85
LIMD1Q9UGP4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 SNORA5B-201ENST00000363786 132 ntBASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 RNA5SP109-201ENST00000391010 116 ntBASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 AC114811.1-201ENST00000507207 168 ntBASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 RNU7-123P-201ENST00000515911 60 ntBASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 RNU6-579P-201ENST00000516879 102 ntBASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 AC084364.2-201ENST00000546924 395 ntBASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 AC078899.2-201ENST00000595282 212 ntBASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 AL033523.1-201ENST00000605153 153 ntBASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 MIR7106-201ENST00000612419 65 ntBASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 AL137790.1-201ENST00000634283 177 ntBASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 MIR2052-201ENST00000636055 55 ntBASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
LIMD1Q9UGP4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.51□□□□□ -1.85
LIMD1Q9UGP4 PWAR6-201ENST00000552334 4618 ntBASIC3.51□□□□□ -1.85
LIMD1Q9UGP4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LIMD1Q9UGP4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LIMD1Q9UGP4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
LIMD1Q9UGP4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.51□□□□□ -1.85
LIMD1Q9UGP4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.51□□□□□ -1.85
LIMD1Q9UGP4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.51□□□□□ -1.85
LIMD1Q9UGP4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.51□□□□□ -1.85
LIMD1Q9UGP4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.51□□□□□ -1.85
LIMD1Q9UGP4 RNU6-301P-201ENST00000384277 107 ntBASIC3.5□□□□□ -1.85
LIMD1Q9UGP4 MIR184-201ENST00000384962 84 ntBASIC3.5□□□□□ -1.85
LIMD1Q9UGP4 RN7SKP200-201ENST00000410564 320 ntBASIC3.5□□□□□ -1.85
LIMD1Q9UGP4 RN7SKP220-201ENST00000410611 288 ntBASIC3.5□□□□□ -1.85
LIMD1Q9UGP4 ARF4P2-201ENST00000430209 526 ntBASIC3.5□□□□□ -1.85
LIMD1Q9UGP4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.5□□□□□ -1.85
LIMD1Q9UGP4 MIR4425-201ENST00000580572 84 ntBASIC3.5□□□□□ -1.85
LIMD1Q9UGP4 uc_338.25-201ENST00000613756 156 ntBASIC3.5□□□□□ -1.85
LIMD1Q9UGP4 AC068647.1-201ENST00000489539 2265 ntBASIC3.5□□□□□ -1.85
LIMD1Q9UGP4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIMD1Q9UGP4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIMD1Q9UGP4 RNU6-294P-201ENST00000364999 102 ntBASIC3.49□□□□□ -1.85
LIMD1Q9UGP4 SNORA27-201ENST00000384323 126 ntBASIC3.49□□□□□ -1.85
LIMD1Q9UGP4 AL034345.1-201ENST00000407768 123 ntBASIC3.49□□□□□ -1.85
LIMD1Q9UGP4 AC006989.1-201ENST00000427212 131 ntBASIC3.49□□□□□ -1.85
LIMD1Q9UGP4 AC092427.1-202ENST00000430569 476 ntBASIC3.49□□□□□ -1.85
LIMD1Q9UGP4 AC104389.3-201ENST00000445629 235 ntBASIC3.49□□□□□ -1.85
LIMD1Q9UGP4 RNU7-96P-201ENST00000459535 64 ntBASIC3.49□□□□□ -1.85
LIMD1Q9UGP4 AC021205.2-201ENST00000480069 347 ntBASIC3.49□□□□□ -1.85
LIMD1Q9UGP4 RNU6-158P-201ENST00000517104 100 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms