Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 AC009831.4-201ENST00000620744 325 ntBASIC2.06□□□□□ -2.08
NKX1-2Q9UD57 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.06□□□□□ -2.08
NKX1-2Q9UD57 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX1-2Q9UD57 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX1-2Q9UD57 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 AC100821.1-201ENST00000523153 2479 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 RNU6-859P-201ENST00000362728 107 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 RNU6-1080P-201ENST00000383982 107 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 Y_RNA.466-201ENST00000384294 113 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 MIR626-201ENST00000385032 94 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 Y_RNA.621-201ENST00000411065 96 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 RPS27P1-201ENST00000450552 247 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 Y_RNA.644-201ENST00000459006 113 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 Y_RNA.674-201ENST00000516362 113 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 MIR514B-201ENST00000516774 80 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 RNU6-341P-201ENST00000516973 96 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 SUB1P4-201ENST00000566062 339 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 MIR4308-201ENST00000580634 81 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 AC078899.2-201ENST00000595282 212 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 Y_RNA.802-201ENST00000614892 130 ntBASIC2.05□□□□□ -2.08
NKX1-2Q9UD57 Y_RNA.4-201ENST00000362333 112 ntBASIC2.04□□□□□ -2.08
NKX1-2Q9UD57 RNA5SP276-201ENST00000362580 94 ntBASIC2.04□□□□□ -2.08
NKX1-2Q9UD57 SNORA16B-201ENST00000364674 135 ntBASIC2.04□□□□□ -2.08
NKX1-2Q9UD57 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.04□□□□□ -2.08
NKX1-2Q9UD57 RNU6-969P-201ENST00000383900 105 ntBASIC2.04□□□□□ -2.08
NKX1-2Q9UD57 SNORA8.3-201ENST00000384679 139 ntBASIC2.04□□□□□ -2.08
NKX1-2Q9UD57 RNA5SP425-201ENST00000410336 112 ntBASIC2.04□□□□□ -2.08
NKX1-2Q9UD57 RNU6-437P-201ENST00000459408 95 ntBASIC2.04□□□□□ -2.08
NKX1-2Q9UD57 RN7SL274P-201ENST00000492268 272 ntBASIC2.04□□□□□ -2.08
NKX1-2Q9UD57 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.04□□□□□ -2.08
NKX1-2Q9UD57 SNORA81.3-201ENST00000517283 198 ntBASIC2.04□□□□□ -2.08
NKX1-2Q9UD57 AC022559.1-201ENST00000520905 205 ntBASIC2.04□□□□□ -2.08
NKX1-2Q9UD57 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NKX1-2Q9UD57 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.04□□□□□ -2.08
NKX1-2Q9UD57 snoU2_19.4-201ENST00000364329 80 ntBASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 SNORA67.4-201ENST00000384688 142 ntBASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 MT-TR-201ENST00000387439 65 ntBASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 RNU11-5P-201ENST00000391216 129 ntBASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 COX6CP10-201ENST00000416832 224 ntBASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 AL138752.1-201ENST00000452964 351 ntBASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 RNU7-94P-201ENST00000459576 63 ntBASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 AC107393.1-201ENST00000512403 346 ntBASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 CBX3P4-201ENST00000538909 354 ntBASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 MIR4724-201ENST00000579485 89 ntBASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 MIR4648-201ENST00000580107 72 ntBASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
NKX1-2Q9UD57 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 SNORA1B-201ENST00000362535 133 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 Y_RNA.29-201ENST00000362570 113 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 RNU6-112P-201ENST00000363599 104 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 RNU6-674P-201ENST00000363831 107 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 Y_RNA.203-201ENST00000364106 102 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 Y_RNA.785-201ENST00000384290 109 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 MIR526A2-201ENST00000390198 65 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 RNU6-918P-201ENST00000391219 106 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 SNORA3.2-201ENST00000408221 125 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 RNU2-52P-201ENST00000410680 190 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 Y_RNA.793-201ENST00000411222 111 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 AC245047.3-201ENST00000429428 127 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 Z83818.1-201ENST00000603584 150 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 AC004792.1-201ENST00000614523 137 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 U1.36-201ENST00000620684 176 ntBASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
NKX1-2Q9UD57 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 MIR367-201ENST00000362299 68 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 SNORA63D-201ENST00000364359 132 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 SNORA4.2-201ENST00000365313 147 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 RNU6-296P-201ENST00000384608 107 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 MIR1287-201ENST00000408492 90 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 RNA5SP100-201ENST00000410903 110 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 RNA5SP59-201ENST00000410922 110 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 RNA5SP489-201ENST00000410986 109 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 MTND2P29-201ENST00000438595 412 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 SCARNA8-201ENST00000515924 131 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 SNORA31.10-201ENST00000516482 106 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 RNU6-453P-201ENST00000516819 85 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 AL353997.5-201ENST00000618886 171 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 MIR8054-201ENST00000620877 86 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 CTSLP2-204ENST00000629029 392 ntBASIC2.01□□□□□ -2.09
NKX1-2Q9UD57 ZNF702P-202ENST00000434269 1966 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms