Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC091895.1-201ENST00000624494 256 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.4□□□□□ -2.02
KCMF1Q9P0J7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.4□□□□□ -2.02
KCMF1Q9P0J7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
KCMF1Q9P0J7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
KCMF1Q9P0J7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
KCMF1Q9P0J7 MIR6073-201ENST00000352083 89 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 SNORA1B-201ENST00000362535 133 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 DEFA7P-201ENST00000382676 285 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 MIR27B-201ENST00000385129 97 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 RNU11-3P-201ENST00000391111 133 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 MIR513C-201ENST00000401352 84 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 RNU2-70P-201ENST00000410718 179 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 SNRPGP10-201ENST00000432323 225 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 RNA5SP148-201ENST00000516527 94 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 RNU6-197P-201ENST00000516680 100 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 RNU7-149P-201ENST00000516739 59 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 RNA5SP137-201ENST00000516833 135 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 MIR378D2-201ENST00000580636 98 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 AC005786.1-201ENST00000588553 154 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 Pinc.1-201ENST00000616452 154 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 MIR6844-201ENST00000637122 62 ntBASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KCMF1Q9P0J7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 Y_RNA.393-201ENST00000383936 102 ntBASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 MLLT10P1-201ENST00000418346 262 ntBASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 CYCSP49-201ENST00000420810 319 ntBASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 AL049830.1-201ENST00000468034 425 ntBASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 NDUFA4P2-201ENST00000489989 244 ntBASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 OR9P1P-201ENST00000496431 281 ntBASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 SNORA31.15-201ENST00000516771 132 ntBASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 RNU2-56P-201ENST00000516826 190 ntBASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 AP002004.2-201ENST00000531656 154 ntBASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 AC112693.2-201ENST00000556538 232 ntBASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 AL049779.4-201ENST00000604500 156 ntBASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 AL137847.3-201ENST00000611521 109 ntBASIC2.39□□□□□ -2.03
KCMF1Q9P0J7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 AC080100.1-201ENST00000624239 5356 ntBASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 MIR126-201ENST00000362291 85 ntBASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 Y_RNA.91-201ENST00000363042 107 ntBASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 RPL30P13-201ENST00000418873 348 ntBASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 AL606517.2-201ENST00000442855 241 ntBASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 RNA5SP320-201ENST00000516263 124 ntBASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 RNA5SP402-201ENST00000517148 110 ntBASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 AL358944.1-201ENST00000528537 144 ntBASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 MIR4446-201ENST00000578505 67 ntBASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 MIR5094-201ENST00000578766 85 ntBASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 AC022217.4-201ENST00000604389 163 ntBASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 AL591926.4-201ENST00000616895 298 ntBASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 MIR203B-201ENST00000636080 86 ntBASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KCMF1Q9P0J7 AP006437.1-201ENST00000641440 3685 ntBASIC2.37□□□□□ -2.03
KCMF1Q9P0J7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
KCMF1Q9P0J7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
KCMF1Q9P0J7 RNU4-82P-201ENST00000362443 140 ntBASIC2.37□□□□□ -2.03
KCMF1Q9P0J7 RNA5SP456-201ENST00000364002 114 ntBASIC2.37□□□□□ -2.03
KCMF1Q9P0J7 RNU1-138P-201ENST00000384093 164 ntBASIC2.37□□□□□ -2.03
KCMF1Q9P0J7 SNORA20-201ENST00000384662 132 ntBASIC2.37□□□□□ -2.03
KCMF1Q9P0J7 RNA5SP109-201ENST00000391010 116 ntBASIC2.37□□□□□ -2.03
KCMF1Q9P0J7 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
KCMF1Q9P0J7 RNU1-104P-201ENST00000517280 175 ntBASIC2.37□□□□□ -2.03
KCMF1Q9P0J7 AC007336.1-201ENST00000576365 3828 ntBASIC2.37□□□□□ -2.03
KCMF1Q9P0J7 AC120024.3-201ENST00000603167 156 ntBASIC2.37□□□□□ -2.03
KCMF1Q9P0J7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 Y_RNA.634-201ENST00000364811 113 ntBASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 RNU6-1336P-201ENST00000383886 109 ntBASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 MIR518A2-201ENST00000384966 87 ntBASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 MIR524-201ENST00000385242 87 ntBASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 RNU6-588P-201ENST00000410281 105 ntBASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 AC007064.1-201ENST00000412238 351 ntBASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 AC245047.3-201ENST00000429428 127 ntBASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 RNA5SP153-201ENST00000516498 76 ntBASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 MIR3646-201ENST00000578301 84 ntBASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 AC069114.2-201ENST00000604699 304 ntBASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.36□□□□□ -2.03
KCMF1Q9P0J7 AC010332.2-201ENST00000613083 1904 ntBASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 SNORD68-201ENST00000363214 84 ntBASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 RNU6-1138P-201ENST00000365359 106 ntBASIC2.35□□□□□ -2.03
KCMF1Q9P0J7 Y_RNA.486-201ENST00000384398 107 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms