Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 BTF3P11-201ENST00000426582 477 ntBASIC2.12□□□□□ -2.07
DDX56Q9NY93 OR9P1P-201ENST00000496431 281 ntBASIC2.12□□□□□ -2.07
DDX56Q9NY93 AC008413.1-201ENST00000511864 177 ntBASIC2.12□□□□□ -2.07
DDX56Q9NY93 RNU7-115P-201ENST00000516433 55 ntBASIC2.12□□□□□ -2.07
DDX56Q9NY93 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.12□□□□□ -2.07
DDX56Q9NY93 IGKV3-31-201ENST00000523109 329 ntBASIC2.12□□□□□ -2.07
DDX56Q9NY93 AL078604.3-201ENST00000615580 211 ntBASIC2.12□□□□□ -2.07
DDX56Q9NY93 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.12□□□□□ -2.07
DDX56Q9NY93 AC095038.3-201ENST00000634439 195 ntBASIC2.12□□□□□ -2.07
DDX56Q9NY93 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
DDX56Q9NY93 WWP1P1-201ENST00000466609 2769 ntBASIC2.11□□□□□ -2.07
DDX56Q9NY93 SNORD27-201ENST00000363981 72 ntBASIC2.11□□□□□ -2.07
DDX56Q9NY93 MIR660-201ENST00000385235 97 ntBASIC2.11□□□□□ -2.07
DDX56Q9NY93 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.11□□□□□ -2.07
DDX56Q9NY93 AC005908.1-201ENST00000468701 347 ntBASIC2.11□□□□□ -2.07
DDX56Q9NY93 RPL23AP54-201ENST00000495129 419 ntBASIC2.11□□□□□ -2.07
DDX56Q9NY93 AC024405.2-202ENST00000532731 184 ntBASIC2.11□□□□□ -2.07
DDX56Q9NY93 MIR1273D-201ENST00000577266 86 ntBASIC2.11□□□□□ -2.07
DDX56Q9NY93 MIR4435-1-201ENST00000582552 80 ntBASIC2.11□□□□□ -2.07
DDX56Q9NY93 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.1□□□□□ -2.07
DDX56Q9NY93 MIR449A-201ENST00000362113 91 ntBASIC2.1□□□□□ -2.07
DDX56Q9NY93 RNU6-899P-201ENST00000363947 107 ntBASIC2.1□□□□□ -2.07
DDX56Q9NY93 Y_RNA.401-201ENST00000383965 117 ntBASIC2.1□□□□□ -2.07
DDX56Q9NY93 Y_RNA.416-201ENST00000384014 113 ntBASIC2.1□□□□□ -2.07
DDX56Q9NY93 RNU1-78P-201ENST00000391248 165 ntBASIC2.1□□□□□ -2.07
DDX56Q9NY93 MIR548H3-201ENST00000408771 118 ntBASIC2.1□□□□□ -2.07
DDX56Q9NY93 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
DDX56Q9NY93 AC079140.2-201ENST00000506193 142 ntBASIC2.1□□□□□ -2.07
DDX56Q9NY93 RNA5SP168-201ENST00000516642 112 ntBASIC2.1□□□□□ -2.07
DDX56Q9NY93 AC127455.1-201ENST00000565496 145 ntBASIC2.1□□□□□ -2.07
DDX56Q9NY93 AC015688.6-201ENST00000577737 104 ntBASIC2.1□□□□□ -2.07
DDX56Q9NY93 AL008718.3-201ENST00000610217 321 ntBASIC2.1□□□□□ -2.07
DDX56Q9NY93 MIR219B-201ENST00000637023 88 ntBASIC2.1□□□□□ -2.07
DDX56Q9NY93 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
DDX56Q9NY93 AC068700.1-201ENST00000565862 3754 ntBASIC2.09□□□□□ -2.07
DDX56Q9NY93 SNORD68-201ENST00000363214 84 ntBASIC2.09□□□□□ -2.07
DDX56Q9NY93 RNU4-41P-201ENST00000364426 143 ntBASIC2.09□□□□□ -2.07
DDX56Q9NY93 RNA5SP259-201ENST00000365541 109 ntBASIC2.09□□□□□ -2.07
DDX56Q9NY93 RNU6-338P-201ENST00000383888 105 ntBASIC2.09□□□□□ -2.07
DDX56Q9NY93 RNU6-211P-201ENST00000384047 107 ntBASIC2.09□□□□□ -2.07
DDX56Q9NY93 RNU6-424P-201ENST00000384367 105 ntBASIC2.09□□□□□ -2.07
DDX56Q9NY93 AL139156.1-201ENST00000412785 841 ntBASIC2.09□□□□□ -2.07
DDX56Q9NY93 RNA5SP364-201ENST00000516938 78 ntBASIC2.09□□□□□ -2.07
DDX56Q9NY93 DEFB122-202ENST00000569013 197 ntBASIC2.09□□□□□ -2.07
DDX56Q9NY93 MIR2681-201ENST00000581814 105 ntBASIC2.09□□□□□ -2.07
DDX56Q9NY93 uc_338.20-201ENST00000621563 178 ntBASIC2.09□□□□□ -2.07
DDX56Q9NY93 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.07
DDX56Q9NY93 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
DDX56Q9NY93 Y_RNA.60-201ENST00000362831 98 ntBASIC2.08□□□□□ -2.08
DDX56Q9NY93 RNU6-1065P-201ENST00000384513 106 ntBASIC2.08□□□□□ -2.08
DDX56Q9NY93 SNORA36B-201ENST00000410438 131 ntBASIC2.08□□□□□ -2.08
DDX56Q9NY93 HMGN1P7-201ENST00000491722 313 ntBASIC2.08□□□□□ -2.08
DDX56Q9NY93 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX56Q9NY93 MIR5692C2-201ENST00000577959 77 ntBASIC2.08□□□□□ -2.08
DDX56Q9NY93 AP000942.4-201ENST00000604811 241 ntBASIC2.08□□□□□ -2.08
DDX56Q9NY93 AC013791.1-201ENST00000616619 62 ntBASIC2.08□□□□□ -2.08
DDX56Q9NY93 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.08□□□□□ -2.08
DDX56Q9NY93 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX56Q9NY93 MIR126-201ENST00000362291 85 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 Y_RNA.122-201ENST00000363331 96 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 Y_RNA.539-201ENST00000384635 107 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 AL023284.1-201ENST00000403956 276 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 Y_RNA.590-201ENST00000410140 107 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 RNA5SP425-201ENST00000410336 112 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 CALM2P4-201ENST00000430810 426 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
DDX56Q9NY93 Z98949.2-201ENST00000440996 144 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 CYCTP-201ENST00000504253 315 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 RNU7-12P-201ENST00000516030 62 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 SUMO2P16-201ENST00000519475 264 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 Y_RNA.783-201ENST00000613546 102 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 JPX_2.1-201ENST00000614161 69 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 AL591926.4-201ENST00000616895 298 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 AC092881.1-201ENST00000638218 2733 ntBASIC2.07□□□□□ -2.08
DDX56Q9NY93 Y_RNA.20-201ENST00000362479 113 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 Y_RNA.65-201ENST00000362846 100 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 Y_RNA.76-201ENST00000362931 109 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 Y_RNA.188-201ENST00000363952 111 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 Y_RNA.203-201ENST00000364106 102 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 Y_RNA.253-201ENST00000364562 112 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 SNORA20.1-201ENST00000364790 130 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 SNORD1A-201ENST00000364968 72 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 RNU6-144P-201ENST00000383951 107 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 SNORA64-201ENST00000384674 134 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 U8.16-201ENST00000391279 133 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 AL445646.1-201ENST00000431784 216 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 AC245517.4-201ENST00000448601 281 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 RNU6-1023P-201ENST00000516137 106 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 Y_RNA.679-201ENST00000516416 91 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 RNU6-1271P-201ENST00000517049 105 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.06□□□□□ -2.08
DDX56Q9NY93 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.06□□□□□ -2.08
DDX56Q9NY93 MIR3935-201ENST00000583472 104 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 BX284668.6-201ENST00000606899 438 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 AL590808.1-201ENST00000618696 141 ntBASIC2.06□□□□□ -2.08
DDX56Q9NY93 AC027279.3-201ENST00000625055 122 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms