Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 MIR3117-201ENST00000584034 78 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 RPL17P51-201ENST00000605218 238 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
SMPD4Q9NXE4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SMPD4Q9NXE4 RNU6-1138P-201ENST00000365359 106 ntBASIC2.67□□□□□ -1.98
SMPD4Q9NXE4 Y_RNA.366-201ENST00000365540 102 ntBASIC2.67□□□□□ -1.98
SMPD4Q9NXE4 SNORD21-201ENST00000383953 95 ntBASIC2.67□□□□□ -1.98
SMPD4Q9NXE4 RNU6-750P-201ENST00000390946 107 ntBASIC2.67□□□□□ -1.98
SMPD4Q9NXE4 RNA5SP210-201ENST00000391034 120 ntBASIC2.67□□□□□ -1.98
SMPD4Q9NXE4 AL441985.1-201ENST00000457727 251 ntBASIC2.67□□□□□ -1.98
SMPD4Q9NXE4 AC008413.1-201ENST00000511864 177 ntBASIC2.67□□□□□ -1.98
SMPD4Q9NXE4 AC008739.2-201ENST00000597006 317 ntBASIC2.67□□□□□ -1.98
SMPD4Q9NXE4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.67□□□□□ -1.98
SMPD4Q9NXE4 AC013412.1-201ENST00000610687 192 ntBASIC2.67□□□□□ -1.98
SMPD4Q9NXE4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.67□□□□□ -1.98
SMPD4Q9NXE4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SMPD4Q9NXE4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SMPD4Q9NXE4 SNORA63.5-201ENST00000363548 123 ntBASIC2.66□□□□□ -1.98
SMPD4Q9NXE4 Y_RNA.323-201ENST00000365157 109 ntBASIC2.66□□□□□ -1.98
SMPD4Q9NXE4 MIR1302-5-201ENST00000408164 150 ntBASIC2.66□□□□□ -1.98
SMPD4Q9NXE4 SNORA19.1-201ENST00000410656 129 ntBASIC2.66□□□□□ -1.98
SMPD4Q9NXE4 RNU7-23P-201ENST00000459465 62 ntBASIC2.66□□□□□ -1.98
SMPD4Q9NXE4 RNA5SP281-201ENST00000516504 135 ntBASIC2.66□□□□□ -1.98
SMPD4Q9NXE4 RNU6-94P-201ENST00000607728 107 ntBASIC2.66□□□□□ -1.98
SMPD4Q9NXE4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.66□□□□□ -1.98
SMPD4Q9NXE4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.66□□□□□ -1.98
SMPD4Q9NXE4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.66□□□□□ -1.98
SMPD4Q9NXE4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.65□□□□□ -1.98
SMPD4Q9NXE4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.65□□□□□ -1.98
SMPD4Q9NXE4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 MIR300-201ENST00000401138 83 ntBASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 RNA5SP136-201ENST00000410906 107 ntBASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 AC009414.1-201ENST00000427200 443 ntBASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 RPL30P4-201ENST00000429309 333 ntBASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 MTATP6P21-201ENST00000440681 189 ntBASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 UBBP3-201ENST00000445497 241 ntBASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 RPL36AP48-201ENST00000485521 314 ntBASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 OR9P1P-201ENST00000496431 281 ntBASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 MIR4753-201ENST00000585119 83 ntBASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 AL442128.1-201ENST00000615151 90 ntBASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.65□□□□□ -1.99
SMPD4Q9NXE4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 RNU1-22P-201ENST00000363334 158 ntBASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 MIR592-201ENST00000384959 97 ntBASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 MIR590-201ENST00000385008 97 ntBASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 EDDM3CP-201ENST00000415977 425 ntBASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 NDUFA4P2-201ENST00000489989 244 ntBASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 COX6CP6-201ENST00000490840 228 ntBASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 RNU6-1149P-201ENST00000516810 97 ntBASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 SCARNA15-202ENST00000516881 127 ntBASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 AC091544.4-201ENST00000555268 342 ntBASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 MIR2681-201ENST00000581814 105 ntBASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 AL137067.1-201ENST00000615933 120 ntBASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.64□□□□□ -1.99
SMPD4Q9NXE4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 RNU6-944P-201ENST00000364023 107 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 RNU6-418P-201ENST00000384035 107 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 SNORD61-201ENST00000384252 73 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 MIR27B-201ENST00000385129 97 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 SNORA26-201ENST00000391286 122 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 EIF4EP4-201ENST00000424916 578 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 AC018634.1-201ENST00000437554 401 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 AC023449.1-201ENST00000454464 154 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 RPS27P22-201ENST00000478056 241 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 RN7SKP12-201ENST00000516275 143 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 AC109329.2-201ENST00000519658 482 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 AC011604.1-201ENST00000545978 196 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 U6.73-201ENST00000619194 103 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 U4.3-201ENST00000621047 82 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 MIR376A2-201ENST00000636782 80 ntBASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMPD4Q9NXE4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 RNA5SP289-201ENST00000362332 137 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 RNU1-105P-201ENST00000363470 161 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 RNU6-234P-201ENST00000365229 104 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 MIR29B2-201ENST00000385055 81 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 MT-TI-201ENST00000387365 69 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 AL117342.1-201ENST00000404861 406 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 AC007064.1-201ENST00000412238 351 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 AL513477.1-202ENST00000417061 214 ntBASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.62□□□□□ -1.99
SMPD4Q9NXE4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms