Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RNY3P16-201ENST00000516338 101 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 AC091544.4-201ENST00000555268 342 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 AC022254.1-201ENST00000567857 235 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 MIR4299-201ENST00000577899 72 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
MKS1Q9NXB0 SNORA28-201ENST00000606769 126 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.21□□□□□ -2.06
MKS1Q9NXB0 AC046143.2-201ENST00000609789 160 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 MIR6817-201ENST00000615588 66 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
MKS1Q9NXB0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.2□□□□□ -2.06
MKS1Q9NXB0 RNU6-1209P-201ENST00000363655 107 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 RNA5SP68-201ENST00000363885 119 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 Y_RNA.796-201ENST00000364268 102 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 Y_RNA.799-201ENST00000364992 102 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 Y_RNA.308-201ENST00000365043 101 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 Y_RNA.572-201ENST00000384757 98 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 RNU6-1031P-201ENST00000384773 107 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 MIR23A-201ENST00000385245 73 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 SNORA12.1-201ENST00000390873 148 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 RNU6-360P-201ENST00000390944 104 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 MIR1278-201ENST00000408753 81 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.2□□□□□ -2.06
MKS1Q9NXB0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.2□□□□□ -2.06
MKS1Q9NXB0 Z98949.2-201ENST00000440996 144 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.2□□□□□ -2.06
MKS1Q9NXB0 AC008413.1-201ENST00000511864 177 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 RNU6-138P-201ENST00000515952 107 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 MIR4709-201ENST00000577272 72 ntBASIC2.2□□□□□ -2.06
MKS1Q9NXB0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
MKS1Q9NXB0 AL034345.1-201ENST00000407768 123 ntBASIC2.19□□□□□ -2.06
MKS1Q9NXB0 RNU6-717P-201ENST00000459076 104 ntBASIC2.19□□□□□ -2.06
MKS1Q9NXB0 RNU7-34P-201ENST00000459394 64 ntBASIC2.19□□□□□ -2.06
MKS1Q9NXB0 OR9P1P-201ENST00000496431 281 ntBASIC2.19□□□□□ -2.06
MKS1Q9NXB0 RNA5SP200-201ENST00000516360 103 ntBASIC2.19□□□□□ -2.06
MKS1Q9NXB0 RNA5SP148-201ENST00000516527 94 ntBASIC2.19□□□□□ -2.06
MKS1Q9NXB0 RPL23AP91-201ENST00000569211 455 ntBASIC2.19□□□□□ -2.06
MKS1Q9NXB0 SCARNA15.3-201ENST00000626315 122 ntBASIC2.19□□□□□ -2.06
MKS1Q9NXB0 SCARNA4.1-201ENST00000628597 123 ntBASIC2.19□□□□□ -2.06
MKS1Q9NXB0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MKS1Q9NXB0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.19□□□□□ -2.06
MKS1Q9NXB0 MIR126-201ENST00000362291 85 ntBASIC2.18□□□□□ -2.06
MKS1Q9NXB0 RNU6-923P-201ENST00000364753 107 ntBASIC2.18□□□□□ -2.06
MKS1Q9NXB0 Y_RNA.297-201ENST00000364950 91 ntBASIC2.18□□□□□ -2.06
MKS1Q9NXB0 RNU4-17P-201ENST00000365598 141 ntBASIC2.18□□□□□ -2.06
MKS1Q9NXB0 Y_RNA.510-201ENST00000384511 114 ntBASIC2.18□□□□□ -2.06
MKS1Q9NXB0 RNA5SP496-201ENST00000391240 109 ntBASIC2.18□□□□□ -2.06
MKS1Q9NXB0 SNRPGP10-201ENST00000432323 225 ntBASIC2.18□□□□□ -2.06
MKS1Q9NXB0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.18□□□□□ -2.06
MKS1Q9NXB0 AC108938.1-201ENST00000451204 136 ntBASIC2.18□□□□□ -2.06
MKS1Q9NXB0 AC025033.1-201ENST00000463883 194 ntBASIC2.18□□□□□ -2.06
MKS1Q9NXB0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.18□□□□□ -2.06
MKS1Q9NXB0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
MKS1Q9NXB0 MIR4713-201ENST00000582691 75 ntBASIC2.18□□□□□ -2.06
MKS1Q9NXB0 JPX_2.1-201ENST00000614161 69 ntBASIC2.18□□□□□ -2.06
MKS1Q9NXB0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.17□□□□□ -2.06
MKS1Q9NXB0 SNORD68-201ENST00000363214 84 ntBASIC2.17□□□□□ -2.06
MKS1Q9NXB0 SNORA67.4-201ENST00000384688 142 ntBASIC2.17□□□□□ -2.06
MKS1Q9NXB0 RNU6-493P-201ENST00000391321 108 ntBASIC2.17□□□□□ -2.06
MKS1Q9NXB0 RNA5SP338-201ENST00000410495 85 ntBASIC2.17□□□□□ -2.06
MKS1Q9NXB0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.17□□□□□ -2.06
MKS1Q9NXB0 MIR3162-201ENST00000581818 82 ntBASIC2.17□□□□□ -2.06
MKS1Q9NXB0 Z83818.1-201ENST00000603584 150 ntBASIC2.17□□□□□ -2.06
MKS1Q9NXB0 AL021707.8-201ENST00000609428 183 ntBASIC2.17□□□□□ -2.06
MKS1Q9NXB0 snoU2_19.4-201ENST00000364329 80 ntBASIC2.16□□□□□ -2.06
MKS1Q9NXB0 Y_RNA.229-201ENST00000364347 113 ntBASIC2.16□□□□□ -2.06
MKS1Q9NXB0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
MKS1Q9NXB0 RNU6-381P-201ENST00000391259 108 ntBASIC2.16□□□□□ -2.06
MKS1Q9NXB0 RN7SKP101-201ENST00000411376 320 ntBASIC2.16□□□□□ -2.06
MKS1Q9NXB0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.16□□□□□ -2.06
MKS1Q9NXB0 AL021397.1-201ENST00000451806 248 ntBASIC2.16□□□□□ -2.06
MKS1Q9NXB0 SNORD11-201ENST00000459124 84 ntBASIC2.16□□□□□ -2.06
MKS1Q9NXB0 Y_RNA.700-201ENST00000516806 100 ntBASIC2.16□□□□□ -2.06
MKS1Q9NXB0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.16□□□□□ -2.06
MKS1Q9NXB0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.16□□□□□ -2.06
MKS1Q9NXB0 MIR4308-201ENST00000580634 81 ntBASIC2.16□□□□□ -2.06
MKS1Q9NXB0 MIR4762-201ENST00000585261 75 ntBASIC2.16□□□□□ -2.06
MKS1Q9NXB0 U8.5-201ENST00000364528 136 ntBASIC2.15□□□□□ -2.07
MKS1Q9NXB0 MIR522-201ENST00000385071 87 ntBASIC2.15□□□□□ -2.07
MKS1Q9NXB0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
MKS1Q9NXB0 MLLT10P1-201ENST00000418346 262 ntBASIC2.15□□□□□ -2.07
MKS1Q9NXB0 FTH1P12-201ENST00000432137 551 ntBASIC2.15□□□□□ -2.07
MKS1Q9NXB0 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.15□□□□□ -2.07
MKS1Q9NXB0 AL138752.1-201ENST00000452964 351 ntBASIC2.15□□□□□ -2.07
MKS1Q9NXB0 Y_RNA.644-201ENST00000459006 113 ntBASIC2.15□□□□□ -2.07
MKS1Q9NXB0 AC099513.1-201ENST00000490423 301 ntBASIC2.15□□□□□ -2.07
MKS1Q9NXB0 RN7SKP164-201ENST00000516138 266 ntBASIC2.15□□□□□ -2.07
MKS1Q9NXB0 Y_RNA.674-201ENST00000516362 113 ntBASIC2.15□□□□□ -2.07
MKS1Q9NXB0 CBX3P4-201ENST00000538909 354 ntBASIC2.15□□□□□ -2.07
MKS1Q9NXB0 AC021506.2-201ENST00000612354 169 ntBASIC2.15□□□□□ -2.07
MKS1Q9NXB0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.15□□□□□ -2.07
MKS1Q9NXB0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.15□□□□□ -2.07
MKS1Q9NXB0 AL136360.1-201ENST00000503377 1900 ntBASIC2.15□□□□□ -2.07
MKS1Q9NXB0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MKS1Q9NXB0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
MKS1Q9NXB0 RNU6-661P-201ENST00000362409 107 ntBASIC2.14□□□□□ -2.07
MKS1Q9NXB0 Y_RNA.111-201ENST00000363248 100 ntBASIC2.14□□□□□ -2.07
MKS1Q9NXB0 RNU6-1020P-201ENST00000363684 107 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms