Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC099513.1-201ENST00000490423 301 ntBASIC4.1□□□□□ -1.75
RTN4Q9NQC3 RPS26P48-201ENST00000491713 339 ntBASIC4.1□□□□□ -1.75
RTN4Q9NQC3 RNU1-95P-201ENST00000516357 160 ntBASIC4.1□□□□□ -1.75
RTN4Q9NQC3 RNU1-128P-201ENST00000516704 160 ntBASIC4.1□□□□□ -1.75
RTN4Q9NQC3 SNORD36C-201ENST00000516733 66 ntBASIC4.1□□□□□ -1.75
RTN4Q9NQC3 MRPL49P2-201ENST00000521066 465 ntBASIC4.1□□□□□ -1.75
RTN4Q9NQC3 MIR3939-201ENST00000582614 106 ntBASIC4.1□□□□□ -1.75
RTN4Q9NQC3 MIR6716-201ENST00000613413 80 ntBASIC4.1□□□□□ -1.75
RTN4Q9NQC3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RTN4Q9NQC3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RTN4Q9NQC3 RNU6-414P-201ENST00000363705 104 ntBASIC4.09□□□□□ -1.75
RTN4Q9NQC3 RNA5SP42-201ENST00000364278 115 ntBASIC4.09□□□□□ -1.75
RTN4Q9NQC3 Y_RNA.294-201ENST00000364916 102 ntBASIC4.09□□□□□ -1.75
RTN4Q9NQC3 Y_RNA.351-201ENST00000365436 96 ntBASIC4.09□□□□□ -1.75
RTN4Q9NQC3 RNU6-1056P-201ENST00000383996 107 ntBASIC4.09□□□□□ -1.75
RTN4Q9NQC3 AC006989.1-201ENST00000427212 131 ntBASIC4.09□□□□□ -1.75
RTN4Q9NQC3 AC091390.1-201ENST00000433904 331 ntBASIC4.09□□□□□ -1.75
RTN4Q9NQC3 RNU6-772P-201ENST00000516042 105 ntBASIC4.09□□□□□ -1.75
RTN4Q9NQC3 RNA5SP76-201ENST00000516277 87 ntBASIC4.09□□□□□ -1.75
RTN4Q9NQC3 RNU6-1061P-201ENST00000516530 99 ntBASIC4.09□□□□□ -1.75
RTN4Q9NQC3 AC022149.2-201ENST00000621061 203 ntBASIC4.09□□□□□ -1.75
RTN4Q9NQC3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RTN4Q9NQC3 Y_RNA.346-201ENST00000365385 112 ntBASIC4.08□□□□□ -1.76
RTN4Q9NQC3 SNORA27-201ENST00000384323 126 ntBASIC4.08□□□□□ -1.76
RTN4Q9NQC3 RNA5SP424-201ENST00000390988 115 ntBASIC4.08□□□□□ -1.76
RTN4Q9NQC3 U8.17-201ENST00000391292 132 ntBASIC4.08□□□□□ -1.76
RTN4Q9NQC3 Y_RNA.617-201ENST00000410920 90 ntBASIC4.08□□□□□ -1.76
RTN4Q9NQC3 RNU7-96P-201ENST00000459535 64 ntBASIC4.08□□□□□ -1.76
RTN4Q9NQC3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.08□□□□□ -1.76
RTN4Q9NQC3 SNORA31.9-201ENST00000516429 84 ntBASIC4.08□□□□□ -1.76
RTN4Q9NQC3 SCARNA14-201ENST00000516903 136 ntBASIC4.08□□□□□ -1.76
RTN4Q9NQC3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTN4Q9NQC3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTN4Q9NQC3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTN4Q9NQC3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.07□□□□□ -1.76
RTN4Q9NQC3 Y_RNA.651-201ENST00000459380 103 ntBASIC4.07□□□□□ -1.76
RTN4Q9NQC3 RNA5SP164-201ENST00000516533 110 ntBASIC4.07□□□□□ -1.76
RTN4Q9NQC3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.07□□□□□ -1.76
RTN4Q9NQC3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.07□□□□□ -1.76
RTN4Q9NQC3 MIR3914-2-201ENST00000637339 95 ntBASIC4.07□□□□□ -1.76
RTN4Q9NQC3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.07□□□□□ -1.76
RTN4Q9NQC3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RTN4Q9NQC3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RTN4Q9NQC3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RTN4Q9NQC3 RNU6-938P-201ENST00000411285 103 ntBASIC4.06□□□□□ -1.76
RTN4Q9NQC3 AL035398.1-201ENST00000430869 322 ntBASIC4.06□□□□□ -1.76
RTN4Q9NQC3 RNU7-107P-201ENST00000459121 61 ntBASIC4.06□□□□□ -1.76
RTN4Q9NQC3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RTN4Q9NQC3 MIR6500-201ENST00000622700 86 ntBASIC4.06□□□□□ -1.76
RTN4Q9NQC3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.06□□□□□ -1.76
RTN4Q9NQC3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RTN4Q9NQC3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.05□□□□□ -1.76
RTN4Q9NQC3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RTN4Q9NQC3 AC068647.1-201ENST00000489539 2265 ntBASIC4.05□□□□□ -1.76
RTN4Q9NQC3 RNA5SP136-201ENST00000410906 107 ntBASIC4.05□□□□□ -1.76
RTN4Q9NQC3 MIR2116-201ENST00000517221 80 ntBASIC4.05□□□□□ -1.76
RTN4Q9NQC3 ICE2P2-201ENST00000483823 2787 ntBASIC4.05□□□□□ -1.76
RTN4Q9NQC3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTN4Q9NQC3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTN4Q9NQC3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTN4Q9NQC3 SNORA70C-201ENST00000384538 135 ntBASIC4.04□□□□□ -1.76
RTN4Q9NQC3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.04□□□□□ -1.76
RTN4Q9NQC3 RN7SKP18-201ENST00000516005 275 ntBASIC4.04□□□□□ -1.76
RTN4Q9NQC3 RN7SKP19-201ENST00000516016 252 ntBASIC4.04□□□□□ -1.76
RTN4Q9NQC3 MIR4287-201ENST00000579398 78 ntBASIC4.04□□□□□ -1.76
RTN4Q9NQC3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.04□□□□□ -1.76
RTN4Q9NQC3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTN4Q9NQC3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTN4Q9NQC3 RNA5SP50-201ENST00000363731 107 ntBASIC4.03□□□□□ -1.76
RTN4Q9NQC3 MIR516B2-201ENST00000385190 85 ntBASIC4.03□□□□□ -1.76
RTN4Q9NQC3 RPS29P24-201ENST00000486345 171 ntBASIC4.03□□□□□ -1.76
RTN4Q9NQC3 RNU1-143P-201ENST00000516296 146 ntBASIC4.03□□□□□ -1.76
RTN4Q9NQC3 U1.23-201ENST00000610293 146 ntBASIC4.03□□□□□ -1.76
RTN4Q9NQC3 AL773524.1-201ENST00000614065 229 ntBASIC4.03□□□□□ -1.76
RTN4Q9NQC3 RNU1-68P-201ENST00000615382 146 ntBASIC4.03□□□□□ -1.76
RTN4Q9NQC3 U1.39-201ENST00000621562 146 ntBASIC4.03□□□□□ -1.76
RTN4Q9NQC3 MIR376A2-201ENST00000636782 80 ntBASIC4.03□□□□□ -1.76
RTN4Q9NQC3 MIR302B-201ENST00000362188 73 ntBASIC4.02□□□□□ -1.77
RTN4Q9NQC3 RNU6-661P-201ENST00000362409 107 ntBASIC4.02□□□□□ -1.77
RTN4Q9NQC3 SNORD58C-201ENST00000365223 64 ntBASIC4.02□□□□□ -1.77
RTN4Q9NQC3 SNORA3.3-201ENST00000408712 125 ntBASIC4.02□□□□□ -1.77
RTN4Q9NQC3 AC244636.1-201ENST00000421152 228 ntBASIC4.02□□□□□ -1.77
RTN4Q9NQC3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.02□□□□□ -1.77
RTN4Q9NQC3 AC093850.1-201ENST00000454121 251 ntBASIC4.02□□□□□ -1.77
RTN4Q9NQC3 RNU6-322P-201ENST00000516010 103 ntBASIC4.02□□□□□ -1.77
RTN4Q9NQC3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.02□□□□□ -1.77
RTN4Q9NQC3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RTN4Q9NQC3 Y_RNA.353-201ENST00000365440 108 ntBASIC4.01□□□□□ -1.77
RTN4Q9NQC3 Y_RNA.370-201ENST00000365589 108 ntBASIC4.01□□□□□ -1.77
RTN4Q9NQC3 RNY1P6-201ENST00000384193 109 ntBASIC4.01□□□□□ -1.77
RTN4Q9NQC3 MTATP6P29-201ENST00000415057 132 ntBASIC4.01□□□□□ -1.77
RTN4Q9NQC3 AC006028.1-201ENST00000438379 402 ntBASIC4.01□□□□□ -1.77
RTN4Q9NQC3 RPL23AP6-201ENST00000446637 472 ntBASIC4.01□□□□□ -1.77
RTN4Q9NQC3 AC090821.2-201ENST00000523552 176 ntBASIC4.01□□□□□ -1.77
RTN4Q9NQC3 MIR6733-201ENST00000635723 61 ntBASIC4.01□□□□□ -1.77
RTN4Q9NQC3 AC005336.3-201ENST00000623833 2679 ntBASIC4□□□□□ -1.77
RTN4Q9NQC3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC4□□□□□ -1.77
RTN4Q9NQC3 RN7SL323P-201ENST00000494712 295 ntBASIC4□□□□□ -1.77
RTN4Q9NQC3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC4□□□□□ -1.77
RTN4Q9NQC3 AL137067.1-201ENST00000615933 120 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms