Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 Y_RNA.644-201ENST00000459006 113 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 AL163195.1-201ENST00000496941 348 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 Y_RNA.674-201ENST00000516362 113 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 RNU7-116P-201ENST00000516940 62 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 SNORA81.3-201ENST00000517283 198 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
USP29Q9HBJ7 MIR5089-201ENST00000580047 84 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 MIR4308-201ENST00000580634 81 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 POLR3GP1-201ENST00000594073 261 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
USP29Q9HBJ7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
USP29Q9HBJ7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
USP29Q9HBJ7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USP29Q9HBJ7 AC008555.8-201ENST00000623602 2168 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 Y_RNA.29-201ENST00000362570 113 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 RNU4-10P-201ENST00000364383 140 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 RNU6-47P-201ENST00000383866 107 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 RNU6-144P-201ENST00000383951 107 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 RNU6-376P-201ENST00000384731 106 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 RNU6-918P-201ENST00000391219 106 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 AC019129.1-201ENST00000403786 261 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 RNU2-2P-201ENST00000410396 191 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 AL445646.1-201ENST00000431784 216 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 Z98949.2-201ENST00000440996 144 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.08□□□□□ -2.08
USP29Q9HBJ7 AL138752.1-201ENST00000452964 351 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 RNU1-142P-201ENST00000516682 145 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 Z83818.1-201ENST00000603584 150 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 AC004792.1-201ENST00000614523 137 ntBASIC2.08□□□□□ -2.08
USP29Q9HBJ7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.08□□□□□ -2.08
USP29Q9HBJ7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USP29Q9HBJ7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USP29Q9HBJ7 RNU6-1205P-201ENST00000363625 106 ntBASIC2.07□□□□□ -2.08
USP29Q9HBJ7 Y_RNA.308-201ENST00000365043 101 ntBASIC2.07□□□□□ -2.08
USP29Q9HBJ7 SNORA72-201ENST00000384339 132 ntBASIC2.07□□□□□ -2.08
USP29Q9HBJ7 MIR626-201ENST00000385032 94 ntBASIC2.07□□□□□ -2.08
USP29Q9HBJ7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.07□□□□□ -2.08
USP29Q9HBJ7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.07□□□□□ -2.08
USP29Q9HBJ7 AC245047.4-201ENST00000433189 144 ntBASIC2.07□□□□□ -2.08
USP29Q9HBJ7 MTND5P15-201ENST00000434246 349 ntBASIC2.07□□□□□ -2.08
USP29Q9HBJ7 AC091021.1-201ENST00000468051 388 ntBASIC2.07□□□□□ -2.08
USP29Q9HBJ7 MIR3935-201ENST00000583472 104 ntBASIC2.07□□□□□ -2.08
USP29Q9HBJ7 MIR6079-201ENST00000635807 62 ntBASIC2.07□□□□□ -2.08
USP29Q9HBJ7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.07□□□□□ -2.08
USP29Q9HBJ7 AC018630.2-201ENST00000534866 2403 ntBASIC2.07□□□□□ -2.08
USP29Q9HBJ7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USP29Q9HBJ7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
USP29Q9HBJ7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
USP29Q9HBJ7 RNU4-13P-201ENST00000364019 141 ntBASIC2.06□□□□□ -2.08
USP29Q9HBJ7 RNU6-923P-201ENST00000364753 107 ntBASIC2.06□□□□□ -2.08
USP29Q9HBJ7 SNORA8-201ENST00000384574 139 ntBASIC2.06□□□□□ -2.08
USP29Q9HBJ7 Y_RNA.572-201ENST00000384757 98 ntBASIC2.06□□□□□ -2.08
USP29Q9HBJ7 MIR526A2-201ENST00000390198 65 ntBASIC2.06□□□□□ -2.08
USP29Q9HBJ7 SNORA48.1-201ENST00000390879 135 ntBASIC2.06□□□□□ -2.08
USP29Q9HBJ7 RNA5SP450-201ENST00000411206 102 ntBASIC2.06□□□□□ -2.08
USP29Q9HBJ7 AL606517.2-201ENST00000442855 241 ntBASIC2.06□□□□□ -2.08
USP29Q9HBJ7 RPS27P1-201ENST00000450552 247 ntBASIC2.06□□□□□ -2.08
USP29Q9HBJ7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.06□□□□□ -2.08
USP29Q9HBJ7 RNVU1-2-201ENST00000516326 135 ntBASIC2.06□□□□□ -2.08
USP29Q9HBJ7 RNU6-295P-201ENST00000516901 104 ntBASIC2.06□□□□□ -2.08
USP29Q9HBJ7 RNA5SP364-201ENST00000516938 78 ntBASIC2.06□□□□□ -2.08
USP29Q9HBJ7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.06□□□□□ -2.08
USP29Q9HBJ7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
USP29Q9HBJ7 AC100821.1-201ENST00000523153 2479 ntBASIC2.06□□□□□ -2.08
USP29Q9HBJ7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USP29Q9HBJ7 RNU6-674P-201ENST00000363831 107 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 snoU2_19.4-201ENST00000364329 80 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 SNORA16B-201ENST00000364674 135 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 Y_RNA.293-201ENST00000364908 93 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 Y_RNA.435-201ENST00000384095 112 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 MIR520G-201ENST00000385064 90 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
USP29Q9HBJ7 U8.13-201ENST00000390842 128 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 RNU6-381P-201ENST00000391259 108 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 RNU6-493P-201ENST00000391321 108 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 RNA5SP182-201ENST00000516064 82 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 MIR514B-201ENST00000516774 80 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 RNU6-341P-201ENST00000516973 96 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 RNU6-1096P-201ENST00000517089 102 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 AC084364.2-201ENST00000546924 395 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 MIR5688-201ENST00000580619 83 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 AL929325.1-201ENST00000603096 117 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 AC022217.4-201ENST00000604389 163 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 Y_RNA.802-201ENST00000614892 130 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 U1.36-201ENST00000620684 176 ntBASIC2.05□□□□□ -2.08
USP29Q9HBJ7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
USP29Q9HBJ7 SNORA8.3-201ENST00000384679 139 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 RNA5SP323-201ENST00000391094 133 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 MIR1278-201ENST00000408753 81 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 RNU6-383P-201ENST00000410864 94 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 RNA5SP501-201ENST00000410990 112 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 Y_RNA.793-201ENST00000411222 111 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 COX6CP10-201ENST00000416832 224 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 AL603825.1-201ENST00000438481 80 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 HMGN2P23-201ENST00000456759 269 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 RNU7-120P-201ENST00000459334 63 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 RNU6-437P-201ENST00000459408 95 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms