| NSUN3 | Q9H649 | RNA5SP139-201 | ENST00000364340 | 117 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | SNORD31B-201 | ENST00000364977 | 69 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | RNU6-418P-201 | ENST00000384035 | 107 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | RNU6-1235P-201 | ENST00000384559 | 107 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | RNY1P7-201 | ENST00000384743 | 110 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | RNU6ATAC40P-201 | ENST00000408580 | 137 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | AL513477.1-202 | ENST00000417061 | 214 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | AC097463.2-201 | ENST00000421074 | 142 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | RNU6-498P-201 | ENST00000459468 | 107 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | RNA5SP385-201 | ENST00000515947 | 110 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | RNU6-109P-201 | ENST00000516364 | 107 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | RNU6-184P-201 | ENST00000516514 | 107 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | IGHVIII-67-2-201 | ENST00000519849 | 88 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | TRAV1-1-201 | ENST00000542354 | 392 nt | APPRIS P1 BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | AL442128.1-201 | ENST00000615151 | 90 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | HOTTIP_4.1-201 | ENST00000618195 | 165 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | 5S_rRNA.11-201 | ENST00000618635 | 84 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | U6.73-201 | ENST00000619194 | 103 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | KIAA1107-202 | ENST00000636278 | 4065 nt | APPRIS P1 TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | AC009487.4-201 | ENST00000624969 | 3585 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | SNORA63.5-201 | ENST00000363548 | 123 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | SNORD61-201 | ENST00000384252 | 73 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | RNU6-1274P-201 | ENST00000384557 | 107 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | Y_RNA.544-201 | ENST00000384650 | 113 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | MIR548A2-201 | ENST00000384956 | 97 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | SNORA3.2-201 | ENST00000408221 | 125 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | MIR1294-201 | ENST00000408503 | 142 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | RN7SKP192-201 | ENST00000411291 | 327 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | EDDM3CP-201 | ENST00000415977 | 425 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | RNU6ATAC13P-201 | ENST00000516152 | 131 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | RNU6-948P-201 | ENST00000516374 | 107 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | RNU6-504P-201 | ENST00000516568 | 104 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | RNU6-1149P-201 | ENST00000516810 | 97 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | NCRNA00250-201 | ENST00000519500 | 519 nt | TSL 4 BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | MIR4506-201 | ENST00000584693 | 77 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | AC110079.1-202 | ENST00000635213 | 138 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | MIR376A2-201 | ENST00000636782 | 80 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | SLC6A15-202 | ENST00000309283 | 3108 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | NEB-220 | ENST00000618972 | 26307 nt | APPRIS ALT2 TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | ATP2B1-201 | ENST00000261173 | 6777 nt | APPRIS P1 TSL 1 (best) BASIC | 2.9 | □□□□□ -1.94 | | |
| NSUN3 | Q9H649 | PARPBP-203 | ENST00000392911 | 1916 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RNU6-888P-201 | ENST00000363010 | 101 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RNU6-1240P-201 | ENST00000365155 | 104 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | MIR590-201 | ENST00000385008 | 97 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | SNORA19.1-201 | ENST00000410656 | 129 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RN7SKP123-201 | ENST00000410732 | 291 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RNU6-592P-201 | ENST00000411333 | 103 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | AC007064.1-201 | ENST00000412238 | 351 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | AC008134.1-201 | ENST00000420943 | 193 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | LINC02532-205 | ENST00000430094 | 628 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | Z98742.2-201 | ENST00000431564 | 187 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | MRPS17P9-201 | ENST00000511924 | 393 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | MIR4438-201 | ENST00000585271 | 93 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | AC090115.4-201 | ENST00000609970 | 188 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | AC090517.3-201 | ENST00000625170 | 141 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | AC091564.4-201 | ENST00000533934 | 2194 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | ZNF676-201 | ENST00000397121 | 2944 nt | APPRIS P1 TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | AKAP9-202 | ENST00000358100 | 10309 nt | TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | CCDC66-201 | ENST00000326595 | 3027 nt | APPRIS P3 TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | Y_RNA.49-201 | ENST00000362714 | 112 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | Y_RNA.362-201 | ENST00000365518 | 110 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RNU6-573P-201 | ENST00000383938 | 106 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | MIR767-201 | ENST00000390228 | 109 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | SNORD77.3-201 | ENST00000391113 | 65 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | AL117342.1-201 | ENST00000404861 | 406 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | LINC02269-201 | ENST00000509968 | 511 nt | TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RNU7-172P-201 | ENST00000517125 | 64 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RNU6-1270P-201 | ENST00000517128 | 108 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | CDKN2B-AS.1-201 | ENST00000617921 | 150 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | CTSLP2-204 | ENST00000629029 | 392 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | FNBP1L-203 | ENST00000370253 | 3889 nt | APPRIS ALT1 TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | EYS-202 | ENST00000342421 | 2168 nt | TSL 1 (best) BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | AL589743.1-201 | ENST00000551932 | 2712 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RNU1-72P-201 | ENST00000362976 | 153 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | SNORD24-201 | ENST00000383884 | 75 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RNU6-1113P-201 | ENST00000384348 | 107 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | MIR592-201 | ENST00000384959 | 97 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | MT-TI-201 | ENST00000387365 | 69 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | AC244505.4-201 | ENST00000434905 | 287 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | SSXP5-201 | ENST00000443473 | 287 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | AP004217.1-201 | ENST00000480579 | 346 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | AC011406.1-201 | ENST00000512440 | 370 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RN7SKP12-201 | ENST00000516275 | 143 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RNU6-970P-201 | ENST00000516312 | 107 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RN7SKP282-201 | ENST00000516824 | 299 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | AC090616.3-202 | ENST00000583346 | 205 nt | TSL 2 BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | ATP11C-201 | ENST00000327569 | 6115 nt | APPRIS P3 TSL 1 (best) BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | MIR133A1HG-202 | ENST00000581072 | 4226 nt | TSL 1 (best) BASIC | 2.88 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | NBPF20-202 | ENST00000392971 | 18450 nt | APPRIS P2 TSL 5 BASIC | 2.87 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | GABRG2-229 | ENST00000641017 | 3628 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RNU1-105P-201 | ENST00000363470 | 161 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | Y_RNA.198-201 | ENST00000364013 | 98 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | MIR181B1-201 | ENST00000385240 | 110 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | AL731684.2-201 | ENST00000426839 | 333 nt | TSL 5 BASIC | 2.87 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RPS29P21-201 | ENST00000496272 | 170 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RNU6ATAC17P-201 | ENST00000516074 | 71 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | RNU6-158P-201 | ENST00000517104 | 100 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | JPX_2.1-201 | ENST00000614161 | 69 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | FAM35CP-201 | ENST00000554755 | 2470 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| NSUN3 | Q9H649 | AP006437.1-201 | ENST00000641440 | 3685 nt | BASIC | 2.87 | □□□□□ -1.95 | | |