Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 Y_RNA.287-201ENST00000364853 94 ntBASIC2.01□□□□□ -2.09
CDT1Q9H211 RNU4-70P-201ENST00000384579 139 ntBASIC2.01□□□□□ -2.09
CDT1Q9H211 RNU6-136P-201ENST00000384663 107 ntBASIC2.01□□□□□ -2.09
CDT1Q9H211 RNU6-417P-201ENST00000384712 107 ntBASIC2.01□□□□□ -2.09
CDT1Q9H211 MIR1287-201ENST00000408492 90 ntBASIC2.01□□□□□ -2.09
CDT1Q9H211 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
CDT1Q9H211 AC104332.1-201ENST00000440471 797 ntBASIC2.01□□□□□ -2.09
CDT1Q9H211 RPS20P10-201ENST00000451209 253 ntBASIC2.01□□□□□ -2.09
CDT1Q9H211 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.01□□□□□ -2.09
CDT1Q9H211 AC010598.1-201ENST00000510378 103 ntBASIC2.01□□□□□ -2.09
CDT1Q9H211 RNU6-1053P-201ENST00000515930 101 ntBASIC2.01□□□□□ -2.09
CDT1Q9H211 MIR514B-201ENST00000516774 80 ntBASIC2.01□□□□□ -2.09
CDT1Q9H211 MRPS18CP4-201ENST00000535821 231 ntBASIC2.01□□□□□ -2.09
CDT1Q9H211 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.01□□□□□ -2.09
CDT1Q9H211 AC013791.1-201ENST00000616619 62 ntBASIC2.01□□□□□ -2.09
CDT1Q9H211 AC021753.1-201ENST00000635724 168 ntBASIC2.01□□□□□ -2.09
CDT1Q9H211 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CDT1Q9H211 AC008555.8-201ENST00000623602 2168 ntBASIC2□□□□□ -2.09
CDT1Q9H211 snoU2-30.2-201ENST00000362805 70 ntBASIC2□□□□□ -2.09
CDT1Q9H211 Y_RNA.140-201ENST00000363474 103 ntBASIC2□□□□□ -2.09
CDT1Q9H211 Y_RNA.262-201ENST00000364641 102 ntBASIC2□□□□□ -2.09
CDT1Q9H211 AL117342.1-201ENST00000404861 406 ntBASIC2□□□□□ -2.09
CDT1Q9H211 AL603908.1-201ENST00000406098 201 ntBASIC2□□□□□ -2.09
CDT1Q9H211 RNA5SP511-201ENST00000410487 115 ntBASIC2□□□□□ -2.09
CDT1Q9H211 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2□□□□□ -2.09
CDT1Q9H211 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2□□□□□ -2.09
CDT1Q9H211 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2□□□□□ -2.09
CDT1Q9H211 RNA5SP233-201ENST00000459153 113 ntBASIC2□□□□□ -2.09
CDT1Q9H211 AC079804.2-201ENST00000490376 200 ntBASIC2□□□□□ -2.09
CDT1Q9H211 AC117454.1-201ENST00000491120 168 ntBASIC2□□□□□ -2.09
CDT1Q9H211 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2□□□□□ -2.09
CDT1Q9H211 RNU6-453P-201ENST00000516819 85 ntBASIC2□□□□□ -2.09
CDT1Q9H211 MIR3684-201ENST00000579779 74 ntBASIC2□□□□□ -2.09
CDT1Q9H211 AP000942.3-201ENST00000603702 160 ntBASIC2□□□□□ -2.09
CDT1Q9H211 RNU2-4P-201ENST00000606190 192 ntBASIC2□□□□□ -2.09
CDT1Q9H211 AL078604.3-201ENST00000615580 211 ntBASIC2□□□□□ -2.09
CDT1Q9H211 MIR338-201ENST00000636369 67 ntBASIC2□□□□□ -2.09
CDT1Q9H211 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CDT1Q9H211 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDT1Q9H211 Y_RNA.24-201ENST00000362508 103 ntBASIC1.99□□□□□ -2.09
CDT1Q9H211 RNU6-862P-201ENST00000362804 105 ntBASIC1.99□□□□□ -2.09
CDT1Q9H211 RNU6-818P-201ENST00000364837 108 ntBASIC1.99□□□□□ -2.09
CDT1Q9H211 RNU6-407P-201ENST00000365280 104 ntBASIC1.99□□□□□ -2.09
CDT1Q9H211 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CDT1Q9H211 MIR873-201ENST00000401120 77 ntBASIC1.99□□□□□ -2.09
CDT1Q9H211 AL512604.1-201ENST00000404812 257 ntBASIC1.99□□□□□ -2.09
CDT1Q9H211 RNU6-383P-201ENST00000410864 94 ntBASIC1.99□□□□□ -2.09
CDT1Q9H211 AC099677.2-201ENST00000436385 175 ntBASIC1.99□□□□□ -2.09
CDT1Q9H211 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.99□□□□□ -2.09
CDT1Q9H211 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.99□□□□□ -2.09
CDT1Q9H211 RNA5SP20-201ENST00000515976 84 ntBASIC1.99□□□□□ -2.09
CDT1Q9H211 MTND5P41-201ENST00000517498 206 ntBASIC1.99□□□□□ -2.09
CDT1Q9H211 AC100767.1-201ENST00000528178 123 ntBASIC1.99□□□□□ -2.09
CDT1Q9H211 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.99□□□□□ -2.09
CDT1Q9H211 AC072026.1-201ENST00000605023 201 ntBASIC1.99□□□□□ -2.09
CDT1Q9H211 AC004832.4-201ENST00000608952 331 ntBASIC1.99□□□□□ -2.09
CDT1Q9H211 AC104465.1-201ENST00000611365 139 ntBASIC1.99□□□□□ -2.09
CDT1Q9H211 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CDT1Q9H211 AL359851.1-201ENST00000569460 4997 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 MIR337-201ENST00000362281 93 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 RNU6-117P-201ENST00000365415 107 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 RNU6-187P-201ENST00000384139 106 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 Y_RNA.456-201ENST00000384232 111 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 RNU6-804P-201ENST00000384286 107 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 MIR626-201ENST00000385032 94 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 RNU6-1248P-201ENST00000391096 64 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 RNA5SP465-201ENST00000391195 109 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 RNU6-1135P-201ENST00000411083 103 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 RNU5E-9P-201ENST00000411164 104 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.98□□□□□ -2.09
CDT1Q9H211 RPS26P55-201ENST00000471178 356 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 RPS27P22-201ENST00000478056 241 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 RNU6-1146P-201ENST00000516282 102 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.98□□□□□ -2.09
CDT1Q9H211 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.98□□□□□ -2.09
CDT1Q9H211 AL353149.1-201ENST00000610667 244 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 U6.106-201ENST00000636360 105 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 AC068647.2-201ENST00000637380 353 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 ZNF702P-202ENST00000434269 1966 ntBASIC1.98□□□□□ -2.09
CDT1Q9H211 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
CDT1Q9H211 RNA5SP276-201ENST00000362580 94 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 SNORA33-201ENST00000363664 130 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 Y_RNA.240-201ENST00000364469 95 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 SNORA16.1-201ENST00000364597 132 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 Y_RNA.571-201ENST00000384753 98 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 MT-TT-201ENST00000387460 66 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 RNU6-381P-201ENST00000391259 108 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 RNA5SP467-201ENST00000391274 118 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 RNA5SP450-201ENST00000411206 102 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 AC010409.1-201ENST00000487382 476 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.97□□□□□ -2.09
CDT1Q9H211 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.97□□□□□ -2.09
CDT1Q9H211 MIR4498-201ENST00000577599 66 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 AC005786.1-201ENST00000588553 154 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 AL627230.6-201ENST00000611129 280 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 AC084768.2-201ENST00000622736 221 ntBASIC1.97□□□□□ -2.09
CDT1Q9H211 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 685.4 ms