Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 SNORD114-10-201ENST00000363409 72 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 RNU6-442P-201ENST00000383968 104 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 RNU6-339P-201ENST00000384310 107 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 MIR630-201ENST00000384957 97 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 MIR93-201ENST00000385024 80 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 MIR34B-201ENST00000385076 84 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 MIR1302-7-201ENST00000408841 72 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 RPS15AP28-201ENST00000435088 386 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 RPS27P22-201ENST00000478056 241 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 HIGD1AP3-201ENST00000515857 278 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 SCARNA13-201ENST00000516672 275 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 RNU7-137P-201ENST00000516788 62 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 RNU6-850P-201ENST00000516934 103 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 RNA5SP290-201ENST00000517133 127 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 RNU7-35P-201ENST00000517174 62 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 SNORA70.24-201ENST00000517233 118 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 IGKV2-26-201ENST00000518305 343 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 MIR3152-201ENST00000579801 74 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 MIR5089-201ENST00000580047 84 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 MIR3140-201ENST00000583685 90 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 AP000753.3-201ENST00000604083 169 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 U6.99-201ENST00000637524 83 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 AP000553.6-201ENST00000641242 118 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 AC073869.9-201ENST00000641610 120 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 LINC02471-203ENST00000641941 4752 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 MAPK10-372ENST00000641954 3413 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 ZNF355P-201ENST00000427301 3216 ntBASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-3Q9BYR4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 IPO8P1-201ENST00000455509 3109 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 DEFB108F-201ENST00000344638 222 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 MIR126-201ENST00000362291 85 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 RNU1-108P-201ENST00000362556 161 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 RNA5SP502-201ENST00000362694 119 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 RNU6-1010P-201ENST00000362757 107 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 SNORD36A-201ENST00000362874 73 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 RNU6-1091P-201ENST00000363945 107 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 SNORD14E-201ENST00000364009 85 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 SNORA51.4-201ENST00000364993 124 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 RNU1-100P-201ENST00000365255 165 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 RNU6-342P-201ENST00000384521 104 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 MIR325-201ENST00000385260 98 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 SNORA26.6-201ENST00000391256 115 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 PTMAP5-201ENST00000393073 333 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 MIR1183-201ENST00000408856 89 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 RPS26P47-201ENST00000427219 348 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 AC005326.1-201ENST00000429197 123 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 RNU7-57P-201ENST00000459540 60 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 RNU6-274P-201ENST00000459566 107 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 RPS26P3-201ENST00000470205 348 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 RPS20P22-201ENST00000473700 357 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 AC004057.1-201ENST00000485827 348 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 RN7SL504P-201ENST00000494496 287 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 RPS29P11-201ENST00000496507 171 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 AIG1P1-201ENST00000503376 148 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 AC023141.12-201ENST00000512399 199 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 SNORA74D-201ENST00000516404 141 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 AC090897.2-201ENST00000581715 130 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 MIR7112-201ENST00000616126 65 ntBASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-3Q9BYR4 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms