Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 AC116353.3-201ENST00000511215 249 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 RNA5SP470-201ENST00000516463 106 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 MTND2P32-201ENST00000521584 1038 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 Z94722.1-201ENST00000604328 474 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 AC084368.1-201ENST00000620935 65 ntBASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.33□□□□□ -2.62
SCAPERQ9BY12 ZNF299P-201ENST00000406845 1804 ntBASIC-1.34□□□□□ -2.62
SCAPERQ9BY12 MTCYBP4-201ENST00000401524 249 ntBASIC-1.34□□□□□ -2.62
SCAPERQ9BY12 RNU6-855P-201ENST00000410395 104 ntBASIC-1.34□□□□□ -2.62
SCAPERQ9BY12 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.34□□□□□ -2.62
SCAPERQ9BY12 AC021146.6-201ENST00000514659 117 ntBASIC-1.34□□□□□ -2.62
SCAPERQ9BY12 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.34□□□□□ -2.62
SCAPERQ9BY12 MTND1P35-201ENST00000526739 508 ntBASIC-1.34□□□□□ -2.62
SCAPERQ9BY12 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.34□□□□□ -2.62
SCAPERQ9BY12 uc_338.19-201ENST00000616808 99 ntBASIC-1.34□□□□□ -2.62
SCAPERQ9BY12 MIR8066-201ENST00000617280 78 ntBASIC-1.34□□□□□ -2.62
SCAPERQ9BY12 U6.114-201ENST00000636407 96 ntBASIC-1.34□□□□□ -2.62
SCAPERQ9BY12 MTND5P17-201ENST00000418405 1603 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 SNORD115-8-201ENST00000363856 82 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 RNU6-266P-201ENST00000364225 107 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 SNORD115-38-201ENST00000365037 82 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 RNU6-47P-201ENST00000383866 107 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 RNU6-413P-201ENST00000384115 107 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 MIR204-201ENST00000385200 110 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 MTCO3P40-201ENST00000392516 676 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 ELOCP4-201ENST00000420090 333 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 AC090844.1-201ENST00000422019 156 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 AL500527.2-201ENST00000454105 95 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 RNU7-73P-201ENST00000458743 63 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 MIR4499-201ENST00000584834 69 ntBASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.35□□□□□ -2.63
SCAPERQ9BY12 RNU6-727P-201ENST00000363592 107 ntBASIC-1.36□□□□□ -2.63
SCAPERQ9BY12 RNU4-16P-201ENST00000364737 141 ntBASIC-1.36□□□□□ -2.63
SCAPERQ9BY12 SNORD50B-201ENST00000364995 70 ntBASIC-1.36□□□□□ -2.63
SCAPERQ9BY12 SNORA22B-201ENST00000383876 138 ntBASIC-1.36□□□□□ -2.63
SCAPERQ9BY12 U8.17-201ENST00000391292 132 ntBASIC-1.36□□□□□ -2.63
SCAPERQ9BY12 AC018710.1-201ENST00000506509 158 ntBASIC-1.36□□□□□ -2.63
SCAPERQ9BY12 RPL39P5-202ENST00000512505 151 ntBASIC-1.36□□□□□ -2.63
SCAPERQ9BY12 RN7SKP19-201ENST00000516016 252 ntBASIC-1.36□□□□□ -2.63
SCAPERQ9BY12 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.36□□□□□ -2.63
SCAPERQ9BY12 MIR3941-201ENST00000582572 103 ntBASIC-1.36□□□□□ -2.63
SCAPERQ9BY12 AC093726.3-201ENST00000637588 150 ntBASIC-1.36□□□□□ -2.63
SCAPERQ9BY12 SNORD38C-201ENST00000384381 69 ntBASIC-1.37□□□□□ -2.63
SCAPERQ9BY12 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.37□□□□□ -2.63
SCAPERQ9BY12 SSR1P2-201ENST00000415208 787 ntBASIC-1.37□□□□□ -2.63
SCAPERQ9BY12 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.37□□□□□ -2.63
SCAPERQ9BY12 RNU2-69P-201ENST00000516061 100 ntBASIC-1.37□□□□□ -2.63
SCAPERQ9BY12 RNU6-475P-201ENST00000516073 104 ntBASIC-1.37□□□□□ -2.63
SCAPERQ9BY12 RNU6-830P-201ENST00000516353 107 ntBASIC-1.37□□□□□ -2.63
SCAPERQ9BY12 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.37□□□□□ -2.63
SCAPERQ9BY12 AP001330.5-201ENST00000607176 411 ntBASIC-1.37□□□□□ -2.63
SCAPERQ9BY12 AC006441.5-201ENST00000612680 209 ntBASIC-1.37□□□□□ -2.63
SCAPERQ9BY12 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.37□□□□□ -2.63
SCAPERQ9BY12 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.37□□□□□ -2.63
SCAPERQ9BY12 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.38□□□□□ -2.63
SCAPERQ9BY12 MIR588-201ENST00000384900 83 ntBASIC-1.38□□□□□ -2.63
SCAPERQ9BY12 SNORD115.1-201ENST00000391109 76 ntBASIC-1.38□□□□□ -2.63
SCAPERQ9BY12 MTND3P9-201ENST00000429526 346 ntBASIC-1.38□□□□□ -2.63
SCAPERQ9BY12 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.38□□□□□ -2.63
SCAPERQ9BY12 RNU6-329P-201ENST00000459618 107 ntBASIC-1.38□□□□□ -2.63
SCAPERQ9BY12 RPL23AP75-201ENST00000491601 451 ntBASIC-1.38□□□□□ -2.63
SCAPERQ9BY12 RNA5SP180-201ENST00000516181 101 ntBASIC-1.38□□□□□ -2.63
SCAPERQ9BY12 RNU6-85P-201ENST00000605989 107 ntBASIC-1.38□□□□□ -2.63
SCAPERQ9BY12 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.39□□□□□ -2.63
SCAPERQ9BY12 RNU6-740P-201ENST00000364734 105 ntBASIC-1.39□□□□□ -2.63
SCAPERQ9BY12 U8.6-201ENST00000364939 135 ntBASIC-1.39□□□□□ -2.63
SCAPERQ9BY12 SNORD38B-201ENST00000384690 67 ntBASIC-1.39□□□□□ -2.63
SCAPERQ9BY12 SNORD70.1-201ENST00000391007 85 ntBASIC-1.39□□□□□ -2.63
SCAPERQ9BY12 MIR450B-201ENST00000401182 78 ntBASIC-1.39□□□□□ -2.63
SCAPERQ9BY12 RNU6-847P-201ENST00000411115 108 ntBASIC-1.39□□□□□ -2.63
SCAPERQ9BY12 snoU13.16-201ENST00000459350 104 ntBASIC-1.39□□□□□ -2.63
SCAPERQ9BY12 AC091144.1-201ENST00000519573 138 ntBASIC-1.39□□□□□ -2.63
SCAPERQ9BY12 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.39□□□□□ -2.63
SCAPERQ9BY12 AC069431.2-201ENST00000604149 1099 ntBASIC-1.39□□□□□ -2.63
SCAPERQ9BY12 AC068880.4-201ENST00000623082 495 ntBASIC-1.39□□□□□ -2.63
SCAPERQ9BY12 AL162376.1-201ENST00000624117 175 ntBASIC-1.39□□□□□ -2.63
SCAPERQ9BY12 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 RNU4-36P-201ENST00000364294 144 ntBASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 MT-TF-201ENST00000387314 71 ntBASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 MRPL42P2-201ENST00000403169 426 ntBASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 RNU4-83P-201ENST00000410863 133 ntBASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 AL359999.1-201ENST00000604513 294 ntBASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 MTND2P3-201ENST00000452458 470 ntBASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 RNU2-13P-201ENST00000515909 113 ntBASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 RNU6-158P-201ENST00000517104 100 ntBASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 AL157687.1-201ENST00000554853 619 ntBASIC-1.4□□□□□ -2.63
SCAPERQ9BY12 AC023510.2-201ENST00000622162 746 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms