Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.145-201ENST00000363527 102 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.162-201ENST00000363683 102 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 SNORA72.2-201ENST00000365028 127 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.331-201ENST00000365267 102 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 RNU6-407P-201ENST00000365280 104 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 SNORA4.2-201ENST00000365313 147 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 RNA5SP109-201ENST00000391010 116 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 MIR1253-201ENST00000408273 105 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 RNU6-1186P-201ENST00000410429 97 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 RNU5A-5P-201ENST00000411054 116 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 AL358176.2-201ENST00000425769 204 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 MRPS10P1-201ENST00000448483 130 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 AC005908.1-201ENST00000468701 347 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 RPS27P22-201ENST00000478056 241 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 SNORA31.17-201ENST00000516953 127 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 MIR4438-201ENST00000585271 93 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 DEFB117-201ENST00000602356 141 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 AC022217.4-201ENST00000604389 163 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 AC011373.1-201ENST00000607270 237 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 MIR376A1-201ENST00000616574 68 ntBASIC1.04□□□□□ -2.24
RSPO3Q9BXY4 AC010615.1-201ENST00000594254 1764 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.16-201ENST00000362421 102 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 RNU6-238P-201ENST00000363313 106 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 SNORA63D-201ENST00000364359 132 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.276-201ENST00000364732 109 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.418-201ENST00000384029 102 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 SNORD116-13-201ENST00000384408 92 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 RNU6-505P-201ENST00000384427 107 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.541-201ENST00000384640 113 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 RNU6-136P-201ENST00000384663 107 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 RNU6-1105P-201ENST00000384774 107 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 SNORA12.1-201ENST00000390873 148 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 MIR873-201ENST00000401120 77 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 RNA5SP511-201ENST00000410487 115 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 AC005042.3-201ENST00000453230 174 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 RPS26P55-201ENST00000471178 356 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 RPS26P45-201ENST00000471748 340 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 AC097462.1-201ENST00000514125 324 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 RNU6-327P-201ENST00000516270 127 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 RNU7-99P-201ENST00000516271 62 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 RNU6-1146P-201ENST00000516282 102 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 SNORA31.10-201ENST00000516482 106 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 RNU6-1337P-201ENST00000516525 95 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 AP003733.2-201ENST00000529409 171 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 MIR8074-201ENST00000615081 81 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.03□□□□□ -2.24
RSPO3Q9BXY4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
RSPO3Q9BXY4 AC068700.1-201ENST00000565862 3754 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 RNU6-1266P-201ENST00000362794 105 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.84-201ENST00000363011 104 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.133-201ENST00000363428 110 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 RNU6-324P-201ENST00000363957 106 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 RNU6-1019P-201ENST00000364424 107 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.383-201ENST00000383855 97 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 RNU6-439P-201ENST00000384188 106 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.459-201ENST00000384251 102 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 RNU6-342P-201ENST00000384521 104 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 MIR222-201ENST00000384992 110 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 MIR513A1-201ENST00000385138 129 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 MT-TW-201ENST00000387382 68 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.581-201ENST00000391017 97 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 AL731563.1-201ENST00000442202 214 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 SEPT14P8-201ENST00000508026 178 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 RNU6-635P-201ENST00000516651 102 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 RNU7-172P-201ENST00000517125 64 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 RNU6-902P-201ENST00000517212 91 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 AL117187.1-201ENST00000555482 181 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 AL137100.2-201ENST00000555786 315 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 AC091178.2-201ENST00000584401 117 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 AL359075.3-201ENST00000613288 217 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 AC127459.3-201ENST00000624328 466 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 AC006435.5-201ENST00000624486 112 ntBASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.02□□□□□ -2.25
RSPO3Q9BXY4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 MIR96-201ENST00000362288 78 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 RNU4-80P-201ENST00000363200 141 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 Y_RNA.376-201ENST00000365638 108 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 RNU6-472P-201ENST00000384299 107 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 MIR618-201ENST00000385287 98 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 MIR1285-1-201ENST00000408593 84 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 AC010154.1-201ENST00000425857 269 ntBASIC1.01□□□□□ -2.25
RSPO3Q9BXY4 HSPE1P9-201ENST00000440046 311 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms