Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VRK1Q99986 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
VRK1Q99986 Y_RNA.253-201ENST00000364562 112 ntBASIC2.16□□□□□ -2.06
VRK1Q99986 MT-TR-201ENST00000387439 65 ntBASIC2.16□□□□□ -2.06
VRK1Q99986 RNU6-440P-201ENST00000390882 105 ntBASIC2.16□□□□□ -2.06
VRK1Q99986 RNU6-1228P-201ENST00000391014 107 ntBASIC2.16□□□□□ -2.06
VRK1Q99986 RNA5SP320-201ENST00000516263 124 ntBASIC2.16□□□□□ -2.06
VRK1Q99986 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.16□□□□□ -2.06
VRK1Q99986 U6.106-201ENST00000636360 105 ntBASIC2.16□□□□□ -2.06
VRK1Q99986 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
VRK1Q99986 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
VRK1Q99986 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.16□□□□□ -2.06
VRK1Q99986 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VRK1Q99986 RNU6-1209P-201ENST00000363655 107 ntBASIC2.15□□□□□ -2.07
VRK1Q99986 RNU6-682P-201ENST00000363843 106 ntBASIC2.15□□□□□ -2.07
VRK1Q99986 Y_RNA.555-201ENST00000384673 110 ntBASIC2.15□□□□□ -2.07
VRK1Q99986 RNA5SP482-201ENST00000391269 118 ntBASIC2.15□□□□□ -2.07
VRK1Q99986 RNU2-2P-201ENST00000410396 191 ntBASIC2.15□□□□□ -2.07
VRK1Q99986 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.15□□□□□ -2.07
VRK1Q99986 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.15□□□□□ -2.07
VRK1Q99986 SNORD11-201ENST00000459124 84 ntBASIC2.15□□□□□ -2.07
VRK1Q99986 SCARNA8-201ENST00000515924 131 ntBASIC2.15□□□□□ -2.07
VRK1Q99986 RNA5SP481-201ENST00000516814 122 ntBASIC2.15□□□□□ -2.07
VRK1Q99986 MIR4744-201ENST00000581563 82 ntBASIC2.15□□□□□ -2.07
VRK1Q99986 RNU2-4P-201ENST00000606190 192 ntBASIC2.15□□□□□ -2.07
VRK1Q99986 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.15□□□□□ -2.07
VRK1Q99986 JPX_2.1-201ENST00000614161 69 ntBASIC2.15□□□□□ -2.07
VRK1Q99986 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VRK1Q99986 Y_RNA.75-201ENST00000362927 97 ntBASIC2.14□□□□□ -2.07
VRK1Q99986 RNA5SP212-201ENST00000391223 107 ntBASIC2.14□□□□□ -2.07
VRK1Q99986 MIR548I3-201ENST00000408378 149 ntBASIC2.14□□□□□ -2.07
VRK1Q99986 MIR548I1-201ENST00000408810 149 ntBASIC2.14□□□□□ -2.07
VRK1Q99986 RN7SKP200-201ENST00000410564 320 ntBASIC2.14□□□□□ -2.07
VRK1Q99986 AC009310.1-201ENST00000414414 451 ntBASIC2.14□□□□□ -2.07
VRK1Q99986 AL158823.1-201ENST00000418441 478 ntBASIC2.14□□□□□ -2.07
VRK1Q99986 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.14□□□□□ -2.07
VRK1Q99986 RNA5SP437-201ENST00000517249 129 ntBASIC2.14□□□□□ -2.07
VRK1Q99986 AC022559.1-201ENST00000520905 205 ntBASIC2.14□□□□□ -2.07
VRK1Q99986 RPL23AP91-201ENST00000569211 455 ntBASIC2.14□□□□□ -2.07
VRK1Q99986 MIR4762-201ENST00000585261 75 ntBASIC2.14□□□□□ -2.07
VRK1Q99986 SNORA28-201ENST00000606769 126 ntBASIC2.14□□□□□ -2.07
VRK1Q99986 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
VRK1Q99986 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
VRK1Q99986 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.13□□□□□ -2.07
VRK1Q99986 AC005336.3-201ENST00000623833 2679 ntBASIC2.13□□□□□ -2.07
VRK1Q99986 ZNF702P-202ENST00000434269 1966 ntBASIC2.13□□□□□ -2.07
VRK1Q99986 Y_RNA.240-201ENST00000364469 95 ntBASIC2.13□□□□□ -2.07
VRK1Q99986 SNORA16B-201ENST00000364674 135 ntBASIC2.13□□□□□ -2.07
VRK1Q99986 RNU2-7P-201ENST00000410794 178 ntBASIC2.13□□□□□ -2.07
VRK1Q99986 AC023449.1-201ENST00000454464 154 ntBASIC2.13□□□□□ -2.07
VRK1Q99986 AC245047.8-201ENST00000456455 284 ntBASIC2.13□□□□□ -2.07
VRK1Q99986 RPL23AP63-201ENST00000498752 471 ntBASIC2.13□□□□□ -2.07
VRK1Q99986 SNORA31.10-201ENST00000516482 106 ntBASIC2.13□□□□□ -2.07
VRK1Q99986 RNU6-861P-201ENST00000516745 106 ntBASIC2.13□□□□□ -2.07
VRK1Q99986 RNU6-453P-201ENST00000516819 85 ntBASIC2.13□□□□□ -2.07
VRK1Q99986 SNORD53-201ENST00000579969 78 ntBASIC2.13□□□□□ -2.07
VRK1Q99986 AL591926.4-201ENST00000616895 298 ntBASIC2.13□□□□□ -2.07
VRK1Q99986 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VRK1Q99986 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
VRK1Q99986 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
VRK1Q99986 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VRK1Q99986 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VRK1Q99986 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
VRK1Q99986 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 SNORD114-30-201ENST00000364448 72 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 U8.5-201ENST00000364528 136 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 RNU6-312P-201ENST00000364629 107 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 Y_RNA.265-201ENST00000364677 108 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 Y_RNA.270-201ENST00000364693 104 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 RNU6-578P-201ENST00000390980 103 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 RNU2-55P-201ENST00000411146 174 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 FTH1P12-201ENST00000432137 551 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 SNRPGP10-201ENST00000432323 225 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 AC079804.2-201ENST00000490376 200 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 Y_RNA.797-201ENST00000515977 94 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 RNU6-1007P-201ENST00000516586 107 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 Y_RNA.714-201ENST00000517065 90 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 MRPS18CP4-201ENST00000535821 231 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 AC091544.4-201ENST00000555268 342 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 AC087685.1-201ENST00000587507 141 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.12□□□□□ -2.07
VRK1Q99986 AC108706.1-201ENST00000611053 297 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 AL590808.1-201ENST00000618696 141 ntBASIC2.12□□□□□ -2.07
VRK1Q99986 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.12□□□□□ -2.07
VRK1Q99986 MIRLET7G-201ENST00000362280 84 ntBASIC2.11□□□□□ -2.07
VRK1Q99986 Y_RNA.182-201ENST00000363880 111 ntBASIC2.11□□□□□ -2.07
VRK1Q99986 RNU6-275P-201ENST00000364910 107 ntBASIC2.11□□□□□ -2.07
VRK1Q99986 RNU6-886P-201ENST00000384319 105 ntBASIC2.11□□□□□ -2.07
VRK1Q99986 MIR522-201ENST00000385071 87 ntBASIC2.11□□□□□ -2.07
VRK1Q99986 MT-TT-201ENST00000387460 66 ntBASIC2.11□□□□□ -2.07
VRK1Q99986 AL606845.1-201ENST00000404881 255 ntBASIC2.11□□□□□ -2.07
VRK1Q99986 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.11□□□□□ -2.07
VRK1Q99986 OR9P1P-201ENST00000496431 281 ntBASIC2.11□□□□□ -2.07
VRK1Q99986 Y_RNA.662-201ENST00000516028 97 ntBASIC2.11□□□□□ -2.07
VRK1Q99986 RNU6-1219P-201ENST00000516143 112 ntBASIC2.11□□□□□ -2.07
VRK1Q99986 uc_338.4-201ENST00000616635 176 ntBASIC2.11□□□□□ -2.07
VRK1Q99986 MIR126-201ENST00000362291 85 ntBASIC2.1□□□□□ -2.07
VRK1Q99986 Y_RNA.23-201ENST00000362496 106 ntBASIC2.1□□□□□ -2.07
VRK1Q99986 Y_RNA.180-201ENST00000363867 113 ntBASIC2.1□□□□□ -2.07
VRK1Q99986 SNORA4.2-201ENST00000365313 147 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms