Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 Y_RNA.694-201ENST00000516677 117 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 PRELID2P1-201ENST00000552837 301 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 MIR4753-201ENST00000585119 83 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 AC013412.1-201ENST00000610687 192 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 SNORD114-7-201ENST00000362520 77 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-1209P-201ENST00000363655 107 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 RNA5SP456-201ENST00000364002 114 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-647P-201ENST00000364243 107 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 Y_RNA.388-201ENST00000383919 113 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU2-55P-201ENST00000411146 174 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 HMGN2P32-201ENST00000444648 269 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 AC245102.2-201ENST00000448956 180 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 RPS27P22-201ENST00000478056 241 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 RPS29P24-201ENST00000486345 171 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 RPL36AP21-201ENST00000490372 323 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-965P-201ENST00000516721 96 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 SNORA31.15-201ENST00000516771 132 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU1-104P-201ENST00000517280 175 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 MIR3129-201ENST00000581095 76 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 Pinc.1-201ENST00000616452 154 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 FO624990.1-201ENST00000636373 85 ntBASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDK5RAP1Q96SZ6 AL159152.1-201ENST00000635019 2587 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 MIR449A-201ENST00000362113 91 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 Y_RNA.203-201ENST00000364106 102 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 Y_RNA.348-201ENST00000365403 103 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-49P-201ENST00000384256 107 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 RN7SKP284-201ENST00000411002 343 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 MRPS36P2-201ENST00000512569 299 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 RNA5SP320-201ENST00000516263 124 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 SNORA18.4-201ENST00000516440 124 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU7-149P-201ENST00000516739 59 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-762P-201ENST00000517107 102 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 AC025647.1-201ENST00000517879 253 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 AC105245.1-201ENST00000581934 244 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 AC097639.2-201ENST00000603159 172 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 AL449363.1-201ENST00000617815 186 ntBASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.62□□□□□ -1.99
CDK5RAP1Q96SZ6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 AL596211.1-201ENST00000569873 2277 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU4-82P-201ENST00000362443 140 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 Y_RNA.66-201ENST00000362862 102 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-271P-201ENST00000363858 105 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-1131P-201ENST00000364955 107 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-234P-201ENST00000365229 104 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 RNA5SP210-201ENST00000391034 120 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 AC097463.2-201ENST00000421074 142 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 CALM2P4-201ENST00000430810 426 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 RNA5SP24-201ENST00000516478 95 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-844P-201ENST00000517175 102 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 AL160236.1-201ENST00000556317 195 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 MIR4435-1-201ENST00000582552 80 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 AC106754.2-201ENST00000623006 233 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 AC010297.1-201ENST00000623948 149 ntBASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDK5RAP1Q96SZ6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU1-72P-201ENST00000362976 153 ntBASIC2.6□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-1107P-201ENST00000364817 104 ntBASIC2.6□□□□□ -1.99
CDK5RAP1Q96SZ6 MIR891A-201ENST00000401237 79 ntBASIC2.6□□□□□ -1.99
CDK5RAP1Q96SZ6 RPL30P4-201ENST00000429309 333 ntBASIC2.6□□□□□ -1.99
CDK5RAP1Q96SZ6 AL021397.1-201ENST00000451806 248 ntBASIC2.6□□□□□ -1.99
CDK5RAP1Q96SZ6 RNA5SP153-201ENST00000516498 76 ntBASIC2.6□□□□□ -1.99
CDK5RAP1Q96SZ6 AL035470.1-201ENST00000622571 220 ntBASIC2.6□□□□□ -1.99
CDK5RAP1Q96SZ6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CDK5RAP1Q96SZ6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 RNA5SP393-201ENST00000363423 117 ntBASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 U8.6-201ENST00000364939 135 ntBASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 Y_RNA.346-201ENST00000365385 112 ntBASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 Y_RNA.528-201ENST00000384575 108 ntBASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 MIR562-201ENST00000384894 95 ntBASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 AL359511.1-201ENST00000402970 211 ntBASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 AC007064.1-201ENST00000412238 351 ntBASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 RPL23AP94-201ENST00000512518 302 ntBASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 RNA5SP236-201ENST00000516169 116 ntBASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 SCARNA11.3-201ENST00000517276 130 ntBASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 AC011604.1-201ENST00000545978 196 ntBASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.59□□□□□ -1.99
CDK5RAP1Q96SZ6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.59□□□□□ -2
CDK5RAP1Q96SZ6 RNU1-22P-201ENST00000363334 158 ntBASIC2.58□□□□□ -2
CDK5RAP1Q96SZ6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.58□□□□□ -2
CDK5RAP1Q96SZ6 MIR300-201ENST00000401138 83 ntBASIC2.58□□□□□ -2
CDK5RAP1Q96SZ6 MIR1294-201ENST00000408503 142 ntBASIC2.58□□□□□ -2
CDK5RAP1Q96SZ6 RNA5SP127-201ENST00000411051 133 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms