Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AP001282.2-201ENST00000616149 309 ntBASIC1.8□□□□□ -2.12
SIN3AQ96ST3 RNU6-326P-201ENST00000365480 107 ntBASIC1.79□□□□□ -2.12
SIN3AQ96ST3 Y_RNA.396-201ENST00000383949 103 ntBASIC1.79□□□□□ -2.12
SIN3AQ96ST3 Y_RNA.483-201ENST00000384380 101 ntBASIC1.79□□□□□ -2.12
SIN3AQ96ST3 RNU6-997P-201ENST00000384725 107 ntBASIC1.79□□□□□ -2.12
SIN3AQ96ST3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SIN3AQ96ST3 TRBVB-201ENST00000477100 408 ntBASIC1.79□□□□□ -2.12
SIN3AQ96ST3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.79□□□□□ -2.12
SIN3AQ96ST3 RNU6-1338P-201ENST00000516328 91 ntBASIC1.79□□□□□ -2.12
SIN3AQ96ST3 SNORA31.10-201ENST00000516482 106 ntBASIC1.79□□□□□ -2.12
SIN3AQ96ST3 RNU2-31P-201ENST00000516954 155 ntBASIC1.79□□□□□ -2.12
SIN3AQ96ST3 AL157834.3-201ENST00000615543 103 ntBASIC1.79□□□□□ -2.12
SIN3AQ96ST3 Y_RNA.341-201ENST00000365341 102 ntBASIC1.78□□□□□ -2.12
SIN3AQ96ST3 RNU6-439P-201ENST00000384188 106 ntBASIC1.78□□□□□ -2.12
SIN3AQ96ST3 Y_RNA.461-201ENST00000384263 103 ntBASIC1.78□□□□□ -2.12
SIN3AQ96ST3 Y_RNA.518-201ENST00000384552 113 ntBASIC1.78□□□□□ -2.12
SIN3AQ96ST3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SIN3AQ96ST3 SNORA12.1-201ENST00000390873 148 ntBASIC1.78□□□□□ -2.12
SIN3AQ96ST3 RNU2-7P-201ENST00000410794 178 ntBASIC1.78□□□□□ -2.12
SIN3AQ96ST3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.78□□□□□ -2.12
SIN3AQ96ST3 AC245047.3-201ENST00000429428 127 ntBASIC1.78□□□□□ -2.12
SIN3AQ96ST3 HSPE1P21-201ENST00000438283 308 ntBASIC1.78□□□□□ -2.12
SIN3AQ96ST3 MTND3P2-201ENST00000438452 342 ntBASIC1.78□□□□□ -2.12
SIN3AQ96ST3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.78□□□□□ -2.12
SIN3AQ96ST3 RPL36AP21-201ENST00000490372 323 ntBASIC1.78□□□□□ -2.12
SIN3AQ96ST3 RNU6-341P-201ENST00000516973 96 ntBASIC1.78□□□□□ -2.12
SIN3AQ96ST3 RPL21P9-201ENST00000556149 474 ntBASIC1.78□□□□□ -2.12
SIN3AQ96ST3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SIN3AQ96ST3 Y_RNA.456-201ENST00000384232 111 ntBASIC1.77□□□□□ -2.13
SIN3AQ96ST3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.77□□□□□ -2.13
SIN3AQ96ST3 AC024067.1-201ENST00000426199 223 ntBASIC1.77□□□□□ -2.13
SIN3AQ96ST3 RPS4XP11-201ENST00000446897 772 ntBASIC1.77□□□□□ -2.13
SIN3AQ96ST3 RNU7-94P-201ENST00000459576 63 ntBASIC1.77□□□□□ -2.13
SIN3AQ96ST3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.77□□□□□ -2.13
SIN3AQ96ST3 RNA5SP481-201ENST00000516814 122 ntBASIC1.77□□□□□ -2.13
SIN3AQ96ST3 RNU6-1096P-201ENST00000517089 102 ntBASIC1.77□□□□□ -2.13
SIN3AQ96ST3 DEFB108E-201ENST00000524692 240 ntBASIC1.77□□□□□ -2.13
SIN3AQ96ST3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.77□□□□□ -2.13
SIN3AQ96ST3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.77□□□□□ -2.13
SIN3AQ96ST3 AC103810.8-201ENST00000607347 118 ntBASIC1.77□□□□□ -2.13
SIN3AQ96ST3 MIR8054-201ENST00000620877 86 ntBASIC1.77□□□□□ -2.13
SIN3AQ96ST3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.77□□□□□ -2.13
SIN3AQ96ST3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SIN3AQ96ST3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.76□□□□□ -2.13
SIN3AQ96ST3 AL391987.6-201ENST00000305671 199 ntBASIC1.76□□□□□ -2.13
SIN3AQ96ST3 RNU6-801P-201ENST00000364087 105 ntBASIC1.76□□□□□ -2.13
SIN3AQ96ST3 Y_RNA.237-201ENST00000364439 102 ntBASIC1.76□□□□□ -2.13
SIN3AQ96ST3 SNORA53-201ENST00000391141 249 ntBASIC1.76□□□□□ -2.13
SIN3AQ96ST3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.76□□□□□ -2.13
SIN3AQ96ST3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.76□□□□□ -2.13
SIN3AQ96ST3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.76□□□□□ -2.13
SIN3AQ96ST3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.76□□□□□ -2.13
SIN3AQ96ST3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.76□□□□□ -2.13
SIN3AQ96ST3 AC091959.1-201ENST00000495857 238 ntBASIC1.76□□□□□ -2.13
SIN3AQ96ST3 AC005840.1-201ENST00000498412 377 ntBASIC1.76□□□□□ -2.13
SIN3AQ96ST3 SERF1AP1-201ENST00000514575 187 ntBASIC1.76□□□□□ -2.13
SIN3AQ96ST3 RNU6-1291P-201ENST00000516591 104 ntBASIC1.76□□□□□ -2.13
SIN3AQ96ST3 AL162730.1-201ENST00000605734 292 ntBASIC1.76□□□□□ -2.13
SIN3AQ96ST3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
SIN3AQ96ST3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.75□□□□□ -2.13
SIN3AQ96ST3 MIR520G-201ENST00000385064 90 ntBASIC1.75□□□□□ -2.13
SIN3AQ96ST3 RNU6-440P-201ENST00000390882 105 ntBASIC1.75□□□□□ -2.13
SIN3AQ96ST3 MIR1302-6-201ENST00000408466 90 ntBASIC1.75□□□□□ -2.13
SIN3AQ96ST3 RNU2-14P-201ENST00000411053 191 ntBASIC1.75□□□□□ -2.13
SIN3AQ96ST3 snoU13.27-201ENST00000459278 104 ntBASIC1.75□□□□□ -2.13
SIN3AQ96ST3 SCARNA24.2-201ENST00000516968 130 ntBASIC1.75□□□□□ -2.13
SIN3AQ96ST3 AC136628.3-201ENST00000521868 290 ntBASIC1.75□□□□□ -2.13
SIN3AQ96ST3 AL929325.1-201ENST00000603096 117 ntBASIC1.75□□□□□ -2.13
SIN3AQ96ST3 AC005972.2-201ENST00000604690 348 ntBASIC1.75□□□□□ -2.13
SIN3AQ96ST3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.75□□□□□ -2.13
SIN3AQ96ST3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SIN3AQ96ST3 SNORA25.1-201ENST00000362326 128 ntBASIC1.74□□□□□ -2.13
SIN3AQ96ST3 SNORA1B-201ENST00000362535 133 ntBASIC1.74□□□□□ -2.13
SIN3AQ96ST3 RNU6-1048P-201ENST00000364054 107 ntBASIC1.74□□□□□ -2.13
SIN3AQ96ST3 RNU6-360P-201ENST00000390944 104 ntBASIC1.74□□□□□ -2.13
SIN3AQ96ST3 RNU6-1248P-201ENST00000391096 64 ntBASIC1.74□□□□□ -2.13
SIN3AQ96ST3 SNORA26.5-201ENST00000391215 123 ntBASIC1.74□□□□□ -2.13
SIN3AQ96ST3 RNU11-5P-201ENST00000391216 129 ntBASIC1.74□□□□□ -2.13
SIN3AQ96ST3 AC104332.1-201ENST00000440471 797 ntBASIC1.74□□□□□ -2.13
SIN3AQ96ST3 HSPE1P24-201ENST00000450782 238 ntBASIC1.74□□□□□ -2.13
SIN3AQ96ST3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.74□□□□□ -2.13
SIN3AQ96ST3 AC068647.2-201ENST00000637380 353 ntBASIC1.74□□□□□ -2.13
SIN3AQ96ST3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SIN3AQ96ST3 AC100821.1-201ENST00000523153 2479 ntBASIC1.73□□□□□ -2.13
SIN3AQ96ST3 RNU6-1323P-201ENST00000384025 107 ntBASIC1.73□□□□□ -2.13
SIN3AQ96ST3 SNORA72.4-201ENST00000384174 132 ntBASIC1.73□□□□□ -2.13
SIN3AQ96ST3 snosnR66.1-201ENST00000391095 99 ntBASIC1.73□□□□□ -2.13
SIN3AQ96ST3 MTND4LP30-201ENST00000454092 297 ntBASIC1.73□□□□□ -2.13
SIN3AQ96ST3 AC099513.1-201ENST00000490423 301 ntBASIC1.73□□□□□ -2.13
SIN3AQ96ST3 AL359821.1-201ENST00000605519 182 ntBASIC1.73□□□□□ -2.13
SIN3AQ96ST3 AC037487.3-201ENST00000606668 112 ntBASIC1.73□□□□□ -2.13
SIN3AQ96ST3 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.73□□□□□ -2.13
SIN3AQ96ST3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.73□□□□□ -2.13
SIN3AQ96ST3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SIN3AQ96ST3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SIN3AQ96ST3 UBE2WP1-201ENST00000362030 340 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 MIR335-201ENST00000362173 94 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 Y_RNA.217-201ENST00000364214 105 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 U8.7-201ENST00000364940 136 ntBASIC1.72□□□□□ -2.13
SIN3AQ96ST3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms