Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 HSPE1P13-201ENST00000451143 297 ntBASIC1.35□□□□□ -2.19
ZIM3Q96PE6 SNORA59A-201ENST00000459326 152 ntBASIC1.35□□□□□ -2.19
ZIM3Q96PE6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.35□□□□□ -2.19
ZIM3Q96PE6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.35□□□□□ -2.19
ZIM3Q96PE6 RNU6-138P-201ENST00000515952 107 ntBASIC1.35□□□□□ -2.19
ZIM3Q96PE6 RNA5SP20-201ENST00000515976 84 ntBASIC1.35□□□□□ -2.19
ZIM3Q96PE6 RNU6-1041P-201ENST00000516254 102 ntBASIC1.35□□□□□ -2.19
ZIM3Q96PE6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.35□□□□□ -2.19
ZIM3Q96PE6 AC091178.2-201ENST00000584401 117 ntBASIC1.35□□□□□ -2.19
ZIM3Q96PE6 AL162424.1-201ENST00000602325 221 ntBASIC1.35□□□□□ -2.19
ZIM3Q96PE6 AC006380.1-201ENST00000603598 186 ntBASIC1.35□□□□□ -2.19
ZIM3Q96PE6 U1.36-201ENST00000620684 176 ntBASIC1.35□□□□□ -2.19
ZIM3Q96PE6 AC006435.5-201ENST00000624486 112 ntBASIC1.35□□□□□ -2.19
ZIM3Q96PE6 U6.104-201ENST00000637979 90 ntBASIC1.35□□□□□ -2.19
ZIM3Q96PE6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
ZIM3Q96PE6 RNU1-58P-201ENST00000362413 163 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.54-201ENST00000362766 105 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.65-201ENST00000362846 100 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.292-201ENST00000364904 97 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 U8.7-201ENST00000364940 136 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.456-201ENST00000384232 111 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 Y_RNA.489-201ENST00000384410 101 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 RNU6-160P-201ENST00000384591 107 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 SNORA53-201ENST00000391141 249 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 MIR1278-201ENST00000408753 81 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 RNA5SP511-201ENST00000410487 115 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 RNU2-64P-201ENST00000411315 191 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 EBAG9P1-201ENST00000418955 543 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 CYCSP49-201ENST00000420810 319 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 OOSP1P1-201ENST00000423265 274 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 RPS27P1-201ENST00000450552 247 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 RNU7-141P-201ENST00000459304 62 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 RPS26P45-201ENST00000471748 340 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 RNY3P16-201ENST00000516338 101 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.34□□□□□ -2.19
ZIM3Q96PE6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.34□□□□□ -2.19
ZIM3Q96PE6 BX284668.6-201ENST00000606899 438 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 AL442067.1-201ENST00000613261 223 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.34□□□□□ -2.19
ZIM3Q96PE6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.34□□□□□ -2.19
ZIM3Q96PE6 AC134026.1-201ENST00000623249 2239 ntBASIC1.34□□□□□ -2.2
ZIM3Q96PE6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
ZIM3Q96PE6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
ZIM3Q96PE6 RNU6-862P-201ENST00000362804 105 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 RNU6-407P-201ENST00000365280 104 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 Y_RNA.572-201ENST00000384757 98 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 RNU6-855P-201ENST00000410395 104 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 Y_RNA.626-201ENST00000411288 95 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 AC008134.1-201ENST00000420943 193 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 BTF3P11-201ENST00000426582 477 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.33□□□□□ -2.2
ZIM3Q96PE6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.33□□□□□ -2.2
ZIM3Q96PE6 SUMO1P2-201ENST00000452524 304 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.33□□□□□ -2.2
ZIM3Q96PE6 RPL36AP21-201ENST00000490372 323 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 YWHAEP4-201ENST00000505390 198 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 RPL23AP94-201ENST00000512518 302 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 RNU4-71P-201ENST00000516258 113 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 RNVU1-2-201ENST00000516326 135 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 AC100767.1-201ENST00000528178 123 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 MIR3684-201ENST00000579779 74 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 MIR4308-201ENST00000580634 81 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 MIR4438-201ENST00000585271 93 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.33□□□□□ -2.2
ZIM3Q96PE6 SNORD115-3-201ENST00000363100 82 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 RNU4-10P-201ENST00000364383 140 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 RNU6-200P-201ENST00000364743 107 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 Y_RNA.304-201ENST00000365011 112 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 RNA5SP190-201ENST00000365222 118 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 Y_RNA.341-201ENST00000365341 102 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 RNU6-47P-201ENST00000383866 107 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 MIR30A-201ENST00000385092 71 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 AL162725.1-201ENST00000435405 301 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 AC245102.2-201ENST00000448956 180 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 ATP5J2P3-201ENST00000451550 258 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 Y_RNA.638-201ENST00000459374 113 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.32□□□□□ -2.2
ZIM3Q96PE6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.32□□□□□ -2.2
ZIM3Q96PE6 AC022217.4-201ENST00000604389 163 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 AP003357.1-201ENST00000604497 148 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.32□□□□□ -2.2
ZIM3Q96PE6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
ZIM3Q96PE6 MIR411-201ENST00000362239 96 ntBASIC1.31□□□□□ -2.2
ZIM3Q96PE6 snoU2_19.4-201ENST00000364329 80 ntBASIC1.31□□□□□ -2.2
ZIM3Q96PE6 Y_RNA.552-201ENST00000384665 112 ntBASIC1.31□□□□□ -2.2
ZIM3Q96PE6 RNU6-918P-201ENST00000391219 106 ntBASIC1.31□□□□□ -2.2
ZIM3Q96PE6 PCNPP3-201ENST00000393579 471 ntBASIC1.31□□□□□ -2.2
ZIM3Q96PE6 MIR1298-201ENST00000408783 112 ntBASIC1.31□□□□□ -2.2
ZIM3Q96PE6 AC009310.1-201ENST00000414414 451 ntBASIC1.31□□□□□ -2.2
ZIM3Q96PE6 RPS4XP11-201ENST00000446897 772 ntBASIC1.31□□□□□ -2.2
ZIM3Q96PE6 AC074290.1-201ENST00000448883 135 ntBASIC1.31□□□□□ -2.2
ZIM3Q96PE6 AC010409.1-201ENST00000487382 476 ntBASIC1.31□□□□□ -2.2
ZIM3Q96PE6 RNU7-115P-201ENST00000516433 55 ntBASIC1.31□□□□□ -2.2
ZIM3Q96PE6 AL645939.4-201ENST00000604495 135 ntBASIC1.31□□□□□ -2.2
ZIM3Q96PE6 AC013791.1-201ENST00000616619 62 ntBASIC1.31□□□□□ -2.2
ZIM3Q96PE6 AL365265.1-201ENST00000621045 234 ntBASIC1.31□□□□□ -2.2
ZIM3Q96PE6 RNU6-23P-201ENST00000363283 107 ntBASIC1.3□□□□□ -2.2
ZIM3Q96PE6 RNU6-271P-201ENST00000363858 105 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms